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executable file 24 lines (20 sloc) 425 Bytes
manifest {
mainScript = 'kallisto.nf'
}
params {
output = "results/"
}
process {
container = 'cbcrg/kallisto-nf@sha256:9f840127392d04c9f8e39cb72bcd62ff53cfe0492dde02dc3749bf15f1c547f1'
publishDir = [path: params.output, mode: 'copy', overwrite: 'true']
}
profiles {
crg {
process {
executor='crg'
queue='cn-el6'
memory='16G'
cpus='12'
}
}
}
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