MCMC algorithm for fitting transmission parameters in SID Diarrhea model
There are two R scripts. MCMC_V1.R fits the model with water contabmintion. MCMC_V0.R fits the model without water contamination. mvtnorm Package should be installed.
Based on the paper "Modeling Household Transmission Dynamics: Application to Diarrheal Disease in Central Africa" by Woroszylo et al. (2018)(https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0206418).