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LCLS XFEL updates #517

Merged
merged 12 commits into from Sep 22, 2022
Merged

LCLS XFEL updates #517

merged 12 commits into from Sep 22, 2022

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phyy-nx
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@phyy-nx phyy-nx commented May 5, 2022

This is a collection of updates from data collection during spring 2022

  • Radial average fixes (handle missing images, fix plot_x_max for x_axis=resolution, handle unit cell overlay for normalized data)
  • Rayonix: pick up binning automatically
  • XTC: for 2D spectra, add option to rotate image before summation along an axis to generate a 1D trace
  • XTC: add smd read mode (much slower, but gives a better count of good images)
  • ePix: add parallax, material, and thickness
  • XTC: add background subtraction for spectra

dwpaley and others added 9 commits May 5, 2022 10:25
- Don't crash on missing images (e.g. in an xtc stream)
- Fix plot_x_max for x_axis=resolution
- Rescale hkl markers if pattern is normalized

Co-authored-by: Aaron Brewster <asbrewster@lbl.gov>
Co-authored-by: Aaron Brewster <asbrewster@lbl.gov>
Co-authored-by: David Moreau <dwmoreau@lbl.gov>
Co-authored-by: Aaron Brewster <asbrewster@lbl.gov>
Co-authored-by: Aaron Brewster <asbrewster@lbl.gov>
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codecov bot commented May 5, 2022

Codecov Report

Merging #517 (55c511c) into main (409b3b6) will decrease coverage by 0.11%.
The diff coverage is 16.94%.

Additional details and impacted files
@@            Coverage Diff             @@
##             main     #517      +/-   ##
==========================================
- Coverage   40.86%   40.74%   -0.12%     
==========================================
  Files         176      177       +1     
  Lines       15631    15724      +93     
  Branches     2824     2846      +22     
==========================================
+ Hits         6387     6407      +20     
- Misses       8674     8745      +71     
- Partials      570      572       +2     

@phyy-nx phyy-nx merged commit a57215c into main Sep 22, 2022
@phyy-nx phyy-nx deleted the ly99 branch September 22, 2022 22:11
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4 participants