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@centuri-engineering

CENTURI Multi-Engineering Platform

Common room for CENTURI affiliated developers

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  1. differential-expression_workflow differential-expression_workflow Public

    This workflow performs an RNA-seq analysis from the sequencing output data to the differential expression analyses.

    R 1

  2. omero-utils omero-utils Public

    python and jupyter scripts, widgets and utilities for interacting with omero

    Jupyter Notebook 2

  3. scRNAseq_analysis_workflow scRNAseq_analysis_workflow Public

    Single-Cell RNA-seq analysis workflow for 10x Genomics data

    Python 2

  4. Microbiome-Analysis-Workflow Microbiome-Analysis-Workflow Public

    Forked from metavannier/Microbiome-Analysis-Workflow

    This workflow performs a metabarcoding analysis from the reads sequencing to the production of a report presenting the graphical results.

    Python

Repositories

Showing 10 of 32 repositories
  • ProtruDe Public

    Repository of ImageJ macros and plugins for detecting protrusion in the videos of SARS-CoV-2 spike protein, captured by high-speed atomic force microscope.

    centuri-engineering/ProtruDe’s past year of commit activity
    Java 2 GPL-3.0 0 0 0 Updated Mar 6, 2024
  • differential-expression_workflow Public

    This workflow performs an RNA-seq analysis from the sequencing output data to the differential expression analyses.

    centuri-engineering/differential-expression_workflow’s past year of commit activity
    R 0 BSD-3-Clause 1 0 0 Updated Nov 16, 2023
  • cataloger Public

    Filling form for microscopy image annotations (on the biology side of things)

    centuri-engineering/cataloger’s past year of commit activity
    Python 2 MIT 0 7 1 Updated Jun 9, 2023
  • clicket Public archive

    Adaptation of https://github.com/evereux/flicket app to suit our needs

    centuri-engineering/clicket’s past year of commit activity
    Python 0 MIT 0 3 2 Updated May 1, 2023
  • Microbiome-Analysis-Workflow Public Forked from metavannier/Microbiome-Analysis-Workflow

    This workflow performs a metabarcoding analysis from the reads sequencing to the production of a report presenting the graphical results.

    centuri-engineering/Microbiome-Analysis-Workflow’s past year of commit activity
    Python 0 BSD-3-Clause 1 0 0 Updated Dec 8, 2022
  • metrologist Public archive
    centuri-engineering/metrologist’s past year of commit activity
    Python 0 MIT 2 1 4 Updated Sep 12, 2022
  • motorized-stereotaxic-arm Public
    centuri-engineering/motorized-stereotaxic-arm’s past year of commit activity
    C++ 0 1 0 0 Updated Sep 7, 2022
  • metatranscriptomics-bulkrnaseq_workflow Public Forked from metavannier/metatranscriptomics-bulkrnaseq_workflow

    This workflow performs a metatranscriptomics and bulk RNAseq analysis from the sequencing output data to the differential expression analyses.

    centuri-engineering/metatranscriptomics-bulkrnaseq_workflow’s past year of commit activity
    Python 0 BSD-3-Clause 2 0 0 Updated Jul 27, 2022
  • AdoptOmero Public
    centuri-engineering/AdoptOmero’s past year of commit activity
    Makefile 0 0 0 0 Updated Jun 28, 2022
  • syringe_drivers Public
    centuri-engineering/syringe_drivers’s past year of commit activity
    C++ 1 MPL-2.0 2 0 0 Updated Apr 22, 2022
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