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used different var name for base and mov masks in align_center stage
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adityaapte committed Feb 13, 2019
1 parent b9bdf08 commit 62b3833
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions CERR_core/Contouring/BABS/registerToAtlasMultipleScans.m
Expand Up @@ -70,16 +70,16 @@ function registerToAtlasMultipleScans(baseScanFile,movScanFileC,destnDir,...
baseScanNum = 1;
movScanNum = 1;
algorithm = 'ALIGN CENTER';
baseMask3M = [];
movMask3M = [];
baseMaskAlgCtr3M = [];
movMaskAlgCtr3M = [];
threshold_bone = [];
plmCmdFile = '';
inBspFile = '';
vfAlignCtrFile = fullfile(getCERRPath,'ImageRegistration','tmpFiles',...
strcat(planC{indexS.scan}(1).scanUID,...
planD{indexSD.scan}(1).scanUID,'_align_ctr.nrrd'));
[planC, planD] = register_scans(planC, planD, baseScanNum, movScanNum,...
algorithm, baseMask3M, movMask3M, threshold_bone, plmCmdFile, ...
algorithm, baseMaskAlgCtr3M, movMaskAlgCtr3M, threshold_bone, plmCmdFile, ...
inBspFile, vfAlignCtrFile);
numStructs = length(planC{indexS.structures});

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