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bump biowdl/tasks revision and reduce blacklist
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mlin committed Jun 18, 2019
1 parent e4c099f commit cb94684
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Showing 2 changed files with 4 additions and 5 deletions.
2 changes: 1 addition & 1 deletion test_corpi/biowdl/tasks
7 changes: 3 additions & 4 deletions tests/test_3corpi.py
Original file line number Diff line number Diff line change
Expand Up @@ -203,12 +203,11 @@ class Contrived2(unittest.TestCase):

@test_corpus(
["test_corpi/biowdl/tasks/**"],
expected_lint={'OptionalCoercion': 4, 'NonemptyCoercion': 1, 'UnnecessaryQuantifier': 3, 'UnusedDeclaration': 9},
expected_lint={'UnusedImport': 7, 'OptionalCoercion': 9, 'StringCoercion': 10, 'UnusedDeclaration': 10, 'NonemptyCoercion': 1, 'UnnecessaryQuantifier': 3, 'NameCollision': 1},
check_quant=False,
blacklist=[
# use Object
"common", "bamstats", "seqstat", "flash", "sampleconfig", "strelka",
"stringtie", "vardict", "manta", "somaticseq", "biopet",
# issue #167
"biopet", "flash", "manta"
],
)
class BioWDLTasks(unittest.TestCase):
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