JointIBD

Mathematica code for joint inference of IBD via MCMC. It is also available from the website: http://www.stat.washington.edu/thompson/Genepi/pangaea.shtml.

##Get Started##

1. Clone in Desktop or Download ZIP.
2. Read "README_JointIBD.txt".

##Reference## Zheng, C., Kuhner, M, and Thompson, E. A. 2014. Joint inference of identities by descent along multiple chromosomes from population samples. Journal of Computational Biology, 21: 185-200.