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(function webpackUniversalModuleDefinition(root, factory) { | ||
if(typeof exports === 'object' && typeof module === 'object') | ||
module.exports = factory(); | ||
else if(typeof define === 'function' && define.amd) | ||
define([], factory); | ||
else if(typeof exports === 'object') | ||
exports["screening"] = factory(); | ||
else | ||
root["screening"] = factory(); | ||
})(this, function() { | ||
return /******/ (function(modules) { // webpackBootstrap | ||
/******/ // The module cache | ||
/******/ var installedModules = {}; | ||
|
||
/******/ // The require function | ||
/******/ function __webpack_require__(moduleId) { | ||
|
||
/******/ // Check if module is in cache | ||
/******/ if(installedModules[moduleId]) | ||
/******/ return installedModules[moduleId].exports; | ||
|
||
/******/ // Create a new module (and put it into the cache) | ||
/******/ var module = installedModules[moduleId] = { | ||
/******/ exports: {}, | ||
/******/ id: moduleId, | ||
/******/ loaded: false | ||
/******/ }; | ||
|
||
/******/ // Execute the module function | ||
/******/ modules[moduleId].call(module.exports, module, module.exports, __webpack_require__); | ||
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||
/******/ // Flag the module as loaded | ||
/******/ module.loaded = true; | ||
|
||
/******/ // Return the exports of the module | ||
/******/ return module.exports; | ||
/******/ } | ||
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/******/ // expose the modules object (__webpack_modules__) | ||
/******/ __webpack_require__.m = modules; | ||
|
||
/******/ // expose the module cache | ||
/******/ __webpack_require__.c = installedModules; | ||
|
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/******/ // __webpack_public_path__ | ||
/******/ __webpack_require__.p = ""; | ||
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/******/ // Load entry module and return exports | ||
/******/ return __webpack_require__(0); | ||
/******/ }) | ||
/************************************************************************/ | ||
/******/ ([ | ||
/* 0 */ | ||
/***/ function(module, exports, __webpack_require__) { | ||
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'use strict' | ||
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var Util=__webpack_require__(1); | ||
var Plate=__webpack_require__(2); | ||
var IconNMR=__webpack_require__(3); | ||
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module.exports = { | ||
Util, | ||
Plate, | ||
IconNMR | ||
}; | ||
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/***/ }, | ||
/* 1 */ | ||
/***/ function(module, exports) { | ||
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'use strict' | ||
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/* | ||
Convert 'A5' to | ||
*/ | ||
function positionToNumber(position, width) { | ||
if (width===undefined) throw Error('need to specify width for numberToPosition'); | ||
position=position.toUpperCase().replace(/[^0-9A-Z]/g,''); | ||
var string=position.replace(/[0-9]+/,''); | ||
var number=position.replace(/[A-Z]+/,''); | ||
return (stringToNumber(string)-1)*width+(number*1); | ||
} | ||
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function numberToPosition(number, width) { | ||
if (width===undefined) throw Error('need to specify width for numberToPosition'); | ||
number--; | ||
return numberToString(Math.floor(number/width)+1)+(number%width+1); | ||
} | ||
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function stringToNumber(string) { | ||
var number = 0; | ||
for (var i=0; i<string.length; i++) { | ||
number *= 26; | ||
number += string.charCodeAt(i)-64; | ||
} | ||
return number; | ||
} | ||
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function numberToString(number) { | ||
var string=''; | ||
while (number!=0) { | ||
string = String.fromCharCode((number-1)%26+65) + string; | ||
number = Math.floor((number-1)/26); | ||
} | ||
return string; | ||
} | ||
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module.exports = { | ||
numberToString, | ||
stringToNumber, | ||
numberToPosition, | ||
positionToNumber | ||
} | ||
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/***/ }, | ||
/* 2 */ | ||
/***/ function(module, exports, __webpack_require__) { | ||
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'use strict'; | ||
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var Util=__webpack_require__(1); | ||
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/* | ||
index starts at 1 ! | ||
*/ | ||
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class Plate { | ||
constructor(options) { | ||
options = options || {}; | ||
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this.width = options.width || 12; | ||
this.height = options.height || this.width / 3 * 2; | ||
this.size = this.width * this.height; | ||
this.initialize(); | ||
} | ||
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getWells() { | ||
return this.wells; | ||
} | ||
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select(range) { | ||
if (range) { | ||
this.wells.forEach(function(well) { | ||
well.selected=false; | ||
}); | ||
var reg = /(\d+)(-(\d+))?,?/g; | ||
var m; | ||
while(m = reg.exec(range)) { | ||
var from = +m[1]; | ||
var to = +m[3]; | ||
if(to && from <= to) { | ||
for (var i=from; i<=to; i++) { | ||
var well = this.wells[i-1]; | ||
if (! isEmpty(well.info)) well.selected=true; | ||
} | ||
} else { | ||
var well = this.wells[from-1]; | ||
if (! isEmpty(well.info)) well.selected=true; | ||
} | ||
} | ||
} else { | ||
this.wells.forEach(function(well) { | ||
if (isEmpty(well.info)) { | ||
well.selected=false; | ||
} else { | ||
well.selected=true; | ||
} | ||
}); | ||
} | ||
} | ||
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getArrayElement(index) { | ||
return this.wells[index]; | ||
} | ||
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updateColor(options) { | ||
this.wells.forEach(function(well) { | ||
if (isEmpty(well.info)) { | ||
well.color='white'; | ||
} else if (well.selected) { | ||
well.info.color= 'rgba(144, 238, 144, 1)'; | ||
} else { | ||
well.info.color='rgba(144, 238, 144, 0.3)'; | ||
} | ||
}) | ||
} | ||
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getByPosition(position) { | ||
return this.wells[Util.positionToNumber(position, this.width)-1]; | ||
} | ||
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getByNumber(number) { | ||
return this.wells[number-1]; | ||
} | ||
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initialize() { | ||
this.wells=new Array(this.size); | ||
for (var row=0; row<this.height; row++) { | ||
for (var column=0; column<this.width; column++) { | ||
var i=row*this.width+column; | ||
this.wells[i]={ | ||
number: i+1, | ||
position: Util.numberToPosition(i+1, this.width), | ||
info: {} | ||
}; | ||
} | ||
} | ||
} | ||
} | ||
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function isEmpty(object) { | ||
var isEmpty = Object.keys(object).length === 0 && object.constructor === Object; | ||
return isEmpty; | ||
} | ||
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module.exports=Plate; | ||
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/***/ }, | ||
/* 3 */ | ||
/***/ function(module, exports, __webpack_require__) { | ||
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'use strict' | ||
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var Util=__webpack_require__(1); | ||
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/* | ||
options: | ||
- eol : end of line delimiter (Default: \r\n) | ||
- plateNumber : the position of the plate (Default: 1) | ||
- deleteExistingHolder : flag specifying if existing experiments should be deleted (Default: false) | ||
- autosubmit : submit automatically (Default: false) | ||
*/ | ||
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function generateFile (requests, options) { | ||
var options = options || {}; | ||
var EOL = options.eol || "\r\n"; | ||
var plateNumber = options.plateNumber || 1; | ||
var textFile = []; | ||
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for (var request of requests) { | ||
var holder=getHolder(request.position, plateNumber); | ||
var experimentNumber=getExperimentNumber(request.position); | ||
if (options.deleteExistingHolder) { | ||
textFile.push("USER "+request.user); | ||
textFile.push("HOLDER "+holder); | ||
textFile.push("DELETE"); // this is required to delete already existing entries | ||
} | ||
textFile.push("USER "+request.user); | ||
textFile.push("HOLDER "+holder); | ||
if (! options.autosubmit) textFile.push("NO_SUBMIT"); | ||
textFile.push("NAME "+request.name); | ||
textFile.push("TITLE "+request.title); | ||
for (var experiment of request.experiments) { | ||
textFile.push("EXPNO "+experimentNumber++); | ||
textFile.push("SOLVENT "+experiment.solvent); | ||
textFile.push("EXPERIMENT "+experiment.experiment); | ||
if (experiment.parameters && experiment.parameters.length>0) { | ||
var parameters=[]; | ||
for (var parameter of experiment.parameters) { | ||
parameters.push(parameter.label, parameter.value); | ||
} | ||
textFile.push("PARAMETERS "+parameters.join(',')); | ||
} | ||
} | ||
textFile.push(""); | ||
} | ||
return textFile.join(EOL); | ||
} | ||
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function getHolder(position, plateNumber) { | ||
return plateNumber*100+Util.positionToNumber(position, 12); | ||
} | ||
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function getExperimentNumber(position) { | ||
return Util.positionToNumber(position, 12)*10; | ||
} | ||
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module.exports={ | ||
generateFile | ||
} | ||
|
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/***/ } | ||
/******/ ]) | ||
}); | ||
; |
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