Please help me to resolve this error in prolif. #199
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Shivani8878
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The atom types are not recognized by MDAnalysis, try swapping the types with the names before creating the selections for the ligand and protein :
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Hi @Shivani8878 Maybe MDA does not guess well for some of the atom names you originally had ( |
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Hi, I am using md simulation trajectory to get protein ligand interactions from prolif. but i am facing an error please see the attached image.
![prolif error](https://private-user-images.githubusercontent.com/106540989/320442852-d886d17d-c6f4-4eb7-a2a6-2b3c24cf0bb9.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.eyJpc3MiOiJnaXRodWIuY29tIiwiYXVkIjoicmF3LmdpdGh1YnVzZXJjb250ZW50LmNvbSIsImtleSI6ImtleTUiLCJleHAiOjE3MjAwMzAyMDcsIm5iZiI6MTcyMDAyOTkwNywicGF0aCI6Ii8xMDY1NDA5ODkvMzIwNDQyODUyLWQ4ODZkMTdkLWM2ZjQtNGViNy1hMmE2LTJiM2MyNGNmMGJiOS5wbmc_WC1BbXotQWxnb3JpdGhtPUFXUzQtSE1BQy1TSEEyNTYmWC1BbXotQ3JlZGVudGlhbD1BS0lBVkNPRFlMU0E1M1BRSzRaQSUyRjIwMjQwNzAzJTJGdXMtZWFzdC0xJTJGczMlMkZhd3M0X3JlcXVlc3QmWC1BbXotRGF0ZT0yMDI0MDcwM1QxODA1MDdaJlgtQW16LUV4cGlyZXM9MzAwJlgtQW16LVNpZ25hdHVyZT0zZTc1ZWU1ZjQxNGFkNzhmYjg1MWE0YjczMDFjYTlmOGY0ZDQ2OTMyYzM2ODQ0YmYyMjdlNGY1Yjc1ZWFhOGNhJlgtQW16LVNpZ25lZEhlYWRlcnM9aG9zdCZhY3Rvcl9pZD0wJmtleV9pZD0wJnJlcG9faWQ9MCJ9.MzWjeh4AlJViek0TgoowcLiREP8XsWQKSFaqY3YvN6s)
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