Added complexes to the database, rebuilt a modern Neo4j interface and significance calculation engine
Pre-release
Pre-release
- Added IntAct complex database as a data source
- Modernized Neo4j DB interface.
- Unsupported Java version, bulbs library, and neo4j versions are no more needed.
- Removed dependency on 14.04 or earlier Ubuntu builds.
- Added Gene Identifier overlap conflict resolution
- Corrected a Tax ID parsing bug in Uniprot parser
- Corrected a GeneName parsing bug in Uniprot parser
- Corrected a Cross-Reference tag parsing bug in Uniprot parser
- Updated dockerfile
- Created docker compose file
- Significance calculation now uses Extreme Limit theory (Gumbel Distribution)
- published on Dockerhub
- published on pypi