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SynMap generates a syntenic dotplot between two organisms and identifies syntenic regions

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SynMap-Tools

Vu_VizSciFlow_Poster

SynMap is a tool by CoGe that generates synteny maps between two genomes to identify syntenic regions. This repository contains the tools used in the SynMap pipeline, modified for integration into VizSciFlow.

18626_25868 CDS-CDS last tdd10 cs0 filtered dag all go_D20_g10_A5 aligncoords gcoords

Video Presentation

Tool.Integration.within.VizSciFlow_.A.Visually.Guided.Scientific.Workflow.Management.System_default_4f9ab22d.mp4

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SynMap generates a syntenic dotplot between two organisms and identifies syntenic regions

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