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totakke committed Apr 20, 2017
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### Added

* Add a function to clone bam reader. [#39](https://github.com/chrovis/cljam/pull/39)
* Add to support `lein cloverage`. [#45](https://github.com/chrovis/cljam/pull/45)
* Integration with [Codecov](https://codecov.io/gh/chrovis/cljam). [#46](https://github.com/chrovis/cljam/pull/46)
* Add many tests. [#60](https://github.com/chrovis/cljam/pull/60)

### Changed

* Improves performance of pileup. [#41](https://github.com/chrovis/cljam/pull/41)
* Migrate from midje to clojure.test. [#44](https://github.com/chrovis/cljam/pull/44)
* Add to support `lein cloverage`. [#45](https://github.com/chrovis/cljam/pull/45)
* Correct base qualities if reads are overlapped. [#47](https://github.com/chrovis/cljam/pull/47)
* Use [lein-binplus](https://github.com/BrunoBonacci/lein-binplus) instead of [lein-bin](https://github.com/Raynes/lein-bin). [#48](https://github.com/chrovis/cljam/pull/48)
* Add marks to private fn. [#50](https://github.com/chrovis/cljam/pull/50)
* Refine unused code for newline. [#51](https://github.com/chrovis/cljam/pull/51)
* Pileup without options. [#54](https://github.com/chrovis/cljam/pull/54)
* Refine `trim-chromosome-key`. [#55](https://github.com/chrovis/cljam/pull/55)
* Refine `fastq-char->phred-byte` / Add `phred-byte->fastq-char`. [#56](https://github.com/chrovis/cljam/pull/56)

### Fixed

* Fix for `create-mpileup`. [#52](https://github.com/chrovis/cljam/pull/52)
* Fix for `cljam level` command. [#57](https://github.com/chrovis/cljam/pull/57)

## [0.2.1] - 2017-04-06

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