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  1. stajichlab/PHYling stajichlab/PHYling Public

    Unified PHYling pipeline for species tree building from annotated genomes (see https://github.com/stajichlab/AAFTF and https://github.com/nextgenusfs/funannotate for assembly and annotation steps)

    Python 5 3

  2. dbcanLight dbcanLight Public

    A lightweight rewrite of run_dbcan for better multithread performance

    Python 2 1

  3. plate_image_processing plate_image_processing Public

    Image processing for rhodotorula growth rate pictures

    Python

  4. smk-metagenome smk-metagenome Public

    Snakemake workflow for Metagenomic assembly and binning

    Python

  5. bio-it-station/DoTA bio-it-station/DoTA Public

    Delta profile of Transcription factor and Alternative splicing

    Jupyter Notebook

  6. bio-it-station/iTARGEX bio-it-station/iTARGEX Public

    Identification of trait-associated regulators via deletion array in yeast

    R