Skip to content
Branch: master
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Type Name Latest commit message Commit time
Failed to load latest commit information.
code
images
slides v0 Feb 26, 2018
README.md

README.md

DeepSlides

This study is based on Tensorflow implementation of pix2pix.

if you want to download the image dataset, please click here

Tech

DeepSlides uses a number of open source projects to work properly:

  • [Python]
  • [Tensorflow]
  • [Numpy]

How to use:

  • Download and unzip trained network for ki67 stained breast cancer. (to "code\artificialKi67")

  • Please create a png file. (\Testdata\xxx.png)

  • The size of the square image should be 256*n X 256*n where n=1,2,3,...

  • Draw the possitive and negative cells with green and red colors respectively.

  • Also you can use yellow color to represent possitive cells with staining problem.

  • Run createTissue.py --scale_size image size (256*n)

  • note: Please be sure that images sizes are same in that folder.

  • note: Please be sure that the annotated cells' area are realistic for 40x magnification

example image:

input mask

output image:

input mask

Todos

  • Web based client GUI
You can’t perform that action at this time.