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synapsesuggestor
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README.md

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WORK IN PROGRESS

CATMAID-synapsesuggestor

synapsesuggestor is a django application which acts as a drop-in extension for CATMAID. It contains API endpoints and static files for:

  • Creating synapse detection jobs
  • Adding the results to the catmaid database
  • Viewing and analysing the results

Quick start

  1. Install synapsesuggestor in whichever python environment is running CATMAID with pip install -e path/to/this/directory

  2. Run python manage.py migrate to create the synapsesuggestor models.

  3. Run python manage.py collectstatic -l to pick up synapsesuggestor's static files.