Merge pull request #168 from brian-rose/update-docs

Update all references to source repo

README.rst

@@ -1,6 +1,6 @@
-================
+=======
 climlab
-================
+=======
 
 |docs| |JOSS| |DOI| |pypi| |Build Status| |coverage|
 
@@ -9,7 +9,7 @@ climlab
 -----------------------------------------------------
 
 Author
---------------
+------
 | **Brian E. J. Rose**
 | Department of Atmospheric and Environmental Sciences
 | University at Albany
@@ -84,8 +84,8 @@ Links
 -----
 
 -  HTML documentation: http://climlab.readthedocs.io/en/latest/intro.html
--  Issue tracker: http://github.com/brian-rose/climlab/issues
--  Source code: http://github.com/brian-rose/climlab
+-  Issue tracker: http://github.com/climlab/climlab/issues
+-  Source code: http://github.com/climlab/climlab
 -  JOSS meta-paper: https://doi.org/10.21105/joss.00659
 
 
@@ -137,6 +137,8 @@ Version 0.8.0 (released May 2022)
     Builds of these helper packages are available through conda-forge and will be
     automatically installed as dependencies by conda / mamba.
 
+    The climlab source repo also moved to https://github.com/climlab/climlab
+
     There should be no breaking changes to the user-facing API.
 
     The major motivation for this change was to (vastly) simplify the development
@@ -243,7 +245,7 @@ Version 0.6.0 (released December 2017)
     Provides full Python 3 compatibility, updated documentation, and minor enhancements and bug fixes.
 
 Version 0.5.5 (released early April 2017)
-    Finally provides easy binary distrbution with conda_
+    Finally provides easy binary distribution with conda_
 
 Version 0.5.2 (released late March 2017)
     Many under-the-hood improvements to the build procedure,
@@ -302,8 +304,7 @@ The documentation_ was first created by Moritz Kreuzer
 Contact and Bug Reports
 -----------------------
 Users are strongly encouraged to submit bug reports and feature requests on
-github at
-https://github.com/brian-rose/climlab
+github at https://github.com/climlab/climlab
 
 
 License
@@ -315,10 +316,10 @@ See the accompanying LICENSE file.
    :target: https://doi.org/10.21105/joss.00659
 .. |pypi| image:: https://badge.fury.io/py/climlab.svg
    :target: https://badge.fury.io/py/climlab
-.. |Build Status| image:: https://github.com/brian-rose/minimalf2py/actions/workflows/build-and-test.yaml/badge.svg
-    :target: https://github.com/brian-rose/climlab/actions/workflows/build-and-test.yml
-.. |coverage| image:: https://codecov.io/github/brian-rose/climlab/coverage.svg?branch=main
-   :target: https://codecov.io/github/brian-rose/climlab?branch=main
+.. |Build Status| image:: https://github.com/climlab/climlab/actions/workflows/build-and-test.yaml/badge.svg
+    :target: https://github.com/climlab/climlab/actions/workflows/build-and-test.yml
+.. |coverage| image:: https://codecov.io/github/climlab/climlab/coverage.svg?branch=main
+   :target: https://codecov.io/github/climlab/climlab?branch=main
 .. |DOI| image:: https://zenodo.org/badge/24968065.svg
    :target: https://zenodo.org/badge/latestdoi/24968065
 .. |docs| image:: http://readthedocs.org/projects/climlab/badge/?version=latest

conda-recipe/meta.yaml

@@ -42,13 +42,13 @@ test:
     - codecov
 
 about:
-  home: https://github.com/brian-rose/climlab
+  home: https://github.com/climlab/climlab
   license: MIT
   license_family: MIT
   license_file: LICENSE
   summary: Python package for process-oriented climate modeling
   doc_url: http://climlab.readthedocs.io/
-  dev_url: https://github.com/brian-rose/climlab
+  dev_url: https://github.com/climlab/climlab
 
 extra:
   recipe-maintainers:

docs/README.rst

@@ -18,7 +18,7 @@ Authors
 
 About
 -----
-Sphinx-based documentation for the `climlab` (https://github.com/brian-rose/climlab) package.
+Sphinx-based documentation for the `climlab` (https://github.com/climlab/climlab) package.
 
 The latest rendered version is always available online at `http://climlab.readthedocs.io`
 
@@ -60,4 +60,4 @@ focussing specifically on the EBM (energy balance model) code.
 
 We are gradually expanding and updating the documentation to reflect the full capabilities of `climlab`.
 It is a work-in-progress, and contributions to the documentation
-as pull requests on `github <https://github.com/brian-rose/climlab>`_ are very welcome.
+as pull requests on `github <https://github.com/climlab/climlab>`_ are very welcome.

docs/source/_templates/layout.html

@@ -25,7 +25,7 @@
 
 {#
 {% block footer %}
-        <a rel="license" href="http://creativecommons.org/licenses/by-nc-sa/4.0/"><img alt="Creative Commons License" style="border-width:0" src="https://i.creativecommons.org/l/by-nc-sa/4.0/88x31.png" /></a><br /><span xmlns:dct="http://purl.org/dc/terms/" property="dct:title">climlab Documentation</span> by <span xmlns:cc="http://creativecommons.org/ns#" property="cc:attributionName">Moritz Kreuzer</span> is licensed under a <a rel="license" href="http://creativecommons.org/licenses/by-nc-sa/4.0/">Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License</a>.<br />Based on a work at <a xmlns:dct="http://purl.org/dc/terms/" href="https://github.com/brian-rose/climlab" rel="dct:source">https://github.com/brian-rose/climlab</a>.
+        <a rel="license" href="http://creativecommons.org/licenses/by-nc-sa/4.0/"><img alt="Creative Commons License" style="border-width:0" src="https://i.creativecommons.org/l/by-nc-sa/4.0/88x31.png" /></a><br /><span xmlns:dct="http://purl.org/dc/terms/" property="dct:title">climlab Documentation</span> by <span xmlns:cc="http://creativecommons.org/ns#" property="cc:attributionName">Moritz Kreuzer</span> is licensed under a <a rel="license" href="http://creativecommons.org/licenses/by-nc-sa/4.0/">Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License</a>.<br />Based on a work at <a xmlns:dct="http://purl.org/dc/terms/" href="https://github.com/climlab/climlab" rel="dct:source">https://github.com/climlab/climlab</a>.
 {% endblock %}
 #}
 

docs/source/contact.rst

@@ -11,7 +11,7 @@ The lead developer and maintainer of `climlab` is
 	| brose@albany.edu
 
 Community contributions are very welcome!
-Bugs can be reported through the `issue tracker <https://github.com/brian-rose/climlab/issues>`_ on github.
+Bugs can be reported through the `issue tracker <https://github.com/climlab/climlab/issues>`_ on github.
 
 
 The documentation was originally created by **Moritz Kreuzer**, Potsdam Institut for Climate Impact Research (PIK).

docs/source/contributing.rst

@@ -26,7 +26,7 @@ For publications, please cite the `CLIMLAB description paper in JOSS`_. The full
 Reporting bugs, issues, new feature requests, and documentation problems
 ------------------------------------------------------------------------
 
-These can all be raised as new issues at <https://github.com/brian-rose/climlab/issues>
+These can all be raised as new issues at <https://github.com/climlab/climlab/issues>
 
 If you are reporting a bug, try to include:
 
@@ -46,10 +46,10 @@ Although CLIMLAB is offered to the community "as-is", we are very interested in
 helping people actually use it for scientific purposes.
 
 Have a question about how to do something with CLIMLAB? First, make sure you've
-perused the documentation_ and the issue tracker at <https://github.com/brian-rose/climlab/issues>.
+perused the documentation_ and the issue tracker at <https://github.com/climlab/climlab/issues>.
 Also look through published examples including the online book `The Climate Laboratory`_.
 
-Then, feel free to ask questions by opening a new issue at <https://github.com/brian-rose/climlab/issues>.
+Then, feel free to ask questions by opening a new issue at <https://github.com/climlab/climlab/issues>.
 This requires a free github account but is the best way to engage the community for answers.
 We will do our best to respond. If the functionality you're looking for doesn't
 yet exist, we'll probably encourage you to get involved in developing the next big feature.
@@ -59,13 +59,13 @@ Contributing bug fixes and new features
 ---------------------------------------
 
 We are thrilled to have any and all help.
-You may want to browse through <https://github.com/brian-rose/climlab/issues>
+You may want to browse through <https://github.com/climlab/climlab/issues>
 to see if there is any low-hanging fruit already identified.
 
 Contributions will happen through Pull Requests on github.
 You will need a free github account. Here's how to get started:
 
-1. Follow `these instructions`_ to fork the CLIMLAB repo at <https://github.com/brian-rose/climlab>,
+1. Follow `these instructions`_ to fork the CLIMLAB repo at <https://github.com/climlab/climlab>,
 clone it on your local machine, and keep your local main branch synced with the main repo.
 
 2. Don't make any commits on your local main branch. Instead open a feature branch for every new development task::
@@ -212,7 +212,7 @@ and (optionally) delete the build environment with::
 .. _`Contact page`: contact.html
 .. _ReStructuredText: http://docutils.sourceforge.net/docs/user/rst/quickstart.html
 .. _`these instructions`: https://help.github.com/articles/fork-a-repo/
-.. _`open issue on the CLIMLAB github page`: https://github.com/brian-rose/climlab/issues/68
+.. _`open issue on the CLIMLAB github page`: https://github.com/climlab/climlab/issues/68
 .. _documentation: http://climlab.readthedocs.io
 .. _`pull request`: https://help.github.com/articles/about-pull-requests/
 .. _`numpy.f2py`: https://numpy.org/doc/stable/f2py/

docs/source/installation.rst

@@ -27,7 +27,7 @@ Installing from source
 
 You can clone the source code repository with::
 
-    git clone https://github.com/brian-rose/climlab.git
+    git clone https://github.com/climlab/climlab.git
 
 and from the ``climlab`` directory, do::
 
@@ -60,14 +60,13 @@ and use most of the package. You will see warning messages about the missing com
 .. _`climlab-emanuel-convection`: https://github.com/climlab/climlab-emanuel-convection
 
 
-
 Source Code
 =============
 
 Stables releases as well as the current development version can be found on github:
 
-  * `Stable Releases <https://github.com/brian-rose/climlab/releases>`_
-  * `Development Version <https://github.com/brian-rose/climlab>`_
+  * `Stable Releases <https://github.com/climlab/climlab/releases>`_
+  * `Development Version <https://github.com/climlab/climlab>`_
 
 
 Dependencies

docs/source/tutorial.rst

@@ -13,7 +13,7 @@ For a more comprehensive set of climlab usage examples embedded within lecture n
 see Brian's online textbook `The Climate Laboratory <https://brian-rose.github.io/ClimateLaboratoryBook/>`_.
 
 If you want to run the code yourself, these notes are all available as Jupyter *.ipynb files
-in the ``docs/source/courseware`` directory of the `climlab source <https://github.com/brian-rose/climlab>`_.
+in the ``docs/source/courseware`` directory of the `climlab source <https://github.com/climlab/climlab>`_.
 
 .. toctree::
    :titlesonly:

setup.py

@@ -25,7 +25,7 @@ def readme():
       'Topic :: Scientific/Engineering :: Atmospheric Science',
     ],
     keywords='climate modeling modelling model ebm radiation radiative-convective earth',
-    url='http://github.com/brian-rose/climlab',
+    url='http://github.com/climlab/climlab',
     author='Brian E. J. Rose',
     author_email='brose@albany.edu',
     setup_requires=['numpy'],