README.rst

NIDM-Results for FSL

Export mass-univariate neuroimaging results computed in FSL (using FEAT) as NIDM-Results packs.

A NIDM-Results pack is a compressed file containing a NIDM-Results serialization and some or all of the referenced image data files in compliance with NIDM-Results specification.

Usage

usage: nidmfsl [-h] [-g [GROUP_NAMES [GROUP_NAMES ...]]] [-o OUTPUT_NAME] [-d]

[-v [NIDM_VERSION]] [--version] feat_dir [numsubjects [numsubjects ...]]

NIDM-Results exporter for FSL Feat.

positional arguments:

feat_dir Path to feat directory. numsubjects Number of subjects per group.

optional arguments:

-h, --help

show this help message and exit

-g [GROUP_NAMES [GROUP_NAMES ...]], --group_names [GROUP_NAMES [GROUP_NAMES ...]]

Label for each group.

-o OUTPUT_NAME, --output_name OUTPUT_NAME
	Name of the output. A ".nidm.zip" or ".nidm" (when -d is used) suffix will be appended.
-d, --directory-output
	Produces a .nidm directory rather than a .nidm.zip file.

-v [NIDM_VERSION], --nidm_version [NIDM_VERSION]

NIDM-Results version to use (default: latest).

--version

show program's version number and exit

Requirements

• nidmresults

Installation

pip install nidmfsl