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May29.py
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May29.py
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# -*- coding: utf-8 -*-
"""
Created on Fri May 29 20:56:45 2015
@author: chris
"""
from ramanTools.RamanSpectrum import *
def May20(): ### UVvis of stoichiometric CdSe
a = loadtxt('/home/chris/Documents/DataWeiss/150520/stoichiometric dots.csv', skiprows = 2, unpack = True,delimiter=',')
a[1]-=a[1,0]
a[1]/=0.132
plot(a[0],a[1])
title('stoichiometric dots 513nm 150520')
return 0
def May28(): ##########UVVis of CdS dots
a = loadtxt('/home/chris/Documents/DataWeiss/150528/CdS dots.csv', skiprows = 2, unpack = True,delimiter=',')
a[1]-=a[1,0]
a[1]/=0.132
plot(a[0],a[1])
title('CdS dots 150527')
return 0
def May29():
r = RamanSpectrum('/home/chris/Documents/DataWeiss/150529/150529_05.txt') ### exchanged CdS dots with phosphonic acid (octadecyl)
r.autobaseline((147,1678), order =3)
r.autobaseline((147,356), order = 1)
r.autobaseline((356,389), order = 1, join = 'start')
r.autobaseline((389,892), order = 1, join = 'start')
r.autobaseline((892,923), order = 1, join = 'start')
r.autobaseline((923,1185), order = 1, join = 'start')
r.autobaseline((1185,1211), order = 1, join = 'start')
r.autobaseline((1211,1678), order = 1, join = 'start')
r.smooth()
r.plot()
r = RamanSpectrum('/home/chris/Documents/DataWeiss/150527/150527_06.txt') ### native ligands CdS dots
r.autobaseline((98,764), order = 1)
r.autobaseline((764,839), order = 1, join = 'start')
r.autobaseline((839,1700), order = 2, join = 'start')
r.smooth()
r.plot()
r = RamanSpectrum('/home/chris/Documents/DataWeiss/150521/150521_05.txt') ## stoichiometric ODPA capped CdSe
r = removespikes(r)
r.autobaseline((119,286), order = 0)
r.autobaseline((286,1151), order = 4, join = 'start')
r.autobaseline((1151,1489), order = 3, join = 'start')
r.smooth()
r.plot()
r = RamanSpectrum('/home/chris/Documents/DataWeiss/150408/150408_02.txt') # Cd enriched CdSe
r = removespikes(r)
r.autobaseline((272,1746), order = 2)
#r.autobaseline((1151,1489), order = 3, join = 'start')
r.plot()
legend(['exchanged', 'oleate', 'stoich','rich'])
ylim(-100,2000)
return 0
def May29b():
r = RamanSpectrum('/home/chris/Documents/DataWeiss/150521/150521_05.txt') ## stoichiometric ODPA capped CdSe
r = removespikes(r)
r.autobaseline((119,286), order = 0)
r.autobaseline((286,1151), order = 4, join = 'start')
r.autobaseline((1151,1489), order = 3, join = 'start')
r.smooth()
r.plot()
r = RamanSpectrum('/home/chris/Documents/DataWeiss/150408/150408_02.txt') # Cd enriched CdSe
r = removespikes(r)
r.autobaseline((272,1746), order = 2)
#r.autobaseline((1151,1489), order = 3, join = 'start')
r.plot()
r = RamanSpectrum('/home/chris/Documents/DataWeiss/150516/150516_08.txt')
r = removespikes(r)
r.autobaseline((272,1746), order = 2)
r.smooth()
r.plot()
legend(['stoic', 'rich apr8', 'rich may16'])
return 0
def June1():
clf()
subplot(122)
r = RamanSpectrum('/home/chris/Documents/DataWeiss/150601/150601_07.txt')
c = RamanSpectrum('/home/chris/Documents/DataWeiss/150601/150601_08.txt')
r = add_RamanSpectra(r,c)
r = SPIDcorrect633(r)
r = removespikes(r)
r.autobaseline((145,1148), order = 3)
r.autobaseline((1148,1253), order = 1,join='start')
r.autobaseline((1253,2000), order = 3,join='start')
r.autobaseline((2000,3600), order = 3,join='start')
r.values[:] = r.values[:]*5
#r.smooth()
r.plot()
r= RamanSpectrum('/home/chris/Documents/DataWeiss/150601/150601_09.txt')
c = RamanSpectrum('/home/chris/Documents/DataWeiss/150601/150601_10.txt')
r = add_RamanSpectra(r,c)
r = SPIDcorrect633(r)
#r = removespikes(r)
r.autobaseline((145,1148), order = 2)
r.autobaseline((1148,1253), order = 1,join='start')
r.autobaseline((1253,1700), order = 3,join='start')
r.autobaseline((1700,3600), order = 3,join='start')
r.values[:] = r.values[:]*5
#r.smooth()
r.plot()
legend(['oleate', 'exchanged'])
subplot(121)
r = RamanSpectrum('/home/chris/Documents/DataWeiss/150529/150529_05.txt')
r.autobaseline((147,2000), order =3)
r.autobaseline((147,356), order = 1)
r.autobaseline((356,389), order = 1, join = 'start')
r.autobaseline((389,892), order = 1, join = 'start')
r.autobaseline((892,923), order = 1, join = 'start')
r.autobaseline((923,1185), order = 1, join = 'start')
r.autobaseline((1185,1211), order = 1, join = 'start')
r.autobaseline((1211,1679), order = 2, join = 'start')
r.autobaseline((1679,1702), order = 2, join = 'start')
r.autobaseline((1702,1900), order = 3, join = 'start')
r.smooth()
r.plot()
r = RamanSpectrum('/home/chris/Documents/DataWeiss/150527/150527_06.txt')
r = SPIDcorrect633(r)
r.autobaseline((98,765), order = 4)
r.autobaseline((765,839), order = 2, join = 'start')
r.autobaseline((839,1456), order = 4, join = 'start')
r.autobaseline((1456,1470), order = 2, join = 'start')
r.autobaseline((1470,1900), order = 4, join = 'start')
r.smooth()
r.plot()
legend(['exchanged', 'oleate'])
return 0
def CdSvsCdSe():
r = RamanSpectrum('/home/chris/Documents/DataWeiss/150521/150521_05.txt')
r = removespikes(r)
r.autobaseline((119,286), order = 0)
r.autobaseline((286,1151), order = 4, join = 'start')
r.autobaseline((1151,1560), order = 3, join = 'start')
r.smooth()
r.plot(label = 'CdSe')
r = RamanSpectrum('/home/chris/Documents/DataWeiss/150601/150601_07.txt')
c = RamanSpectrum('/home/chris/Documents/DataWeiss/150601/150601_08.txt')
r = add_RamanSpectra(r,c)
r = SPIDcorrect633(r)
r = removespikes(r)
r.autobaseline((145,1148), order = 3)
r.autobaseline((1148,1253), order = 1,join='start')
r.autobaseline((1253,2000), order = 3,join='start')
r.autobaseline((2000,3600), order = 3,join='start')
r.values[:] = r.values[:]*5
#r.smooth()
r.plot(label='CdS')
legend(['CdSe','CdS'])
return 0