/
__init__.py
59 lines (43 loc) · 1.48 KB
/
__init__.py
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import argparse
import sys
import ruamel.yaml
import os
import logging
logging.basicConfig(level=logging.INFO)
import connexion
import connexion.utils as utils
from connexion.resolver import Resolver
def setup(args=None):
if args is None:
args = argparse.Namespace()
configfile = "config.yml"
if os.path.isfile(configfile):
logging.info("Loading %s", configfile)
with open(configfile, "r") as f:
config = ruamel.yaml.safe_load(f)
for c in config:
setattr(args, c, config[c])
logging.info("Using config:")
for n in args.__dict__:
logging.info(" %s: %s", n, getattr(args, n))
app = connexion.App(__name__)
backend = utils.get_function_from_name(
args.backend + ".create_backend")(args.opt)
def rs(x):
return getattr(backend, x)
app.add_api(
'openapi/workflow_execution_service.swagger.yaml',
resolver=Resolver(rs))
return app
def main(argv=sys.argv[1:]):
parser = argparse.ArgumentParser(description='Workflow Execution Service')
parser.add_argument(
"--backend", type=str, default="wes_service.cwl_runner")
parser.add_argument("--port", type=int, default=8080)
parser.add_argument("--opt", type=str, action="append")
parser.add_argument("--debug", action="store_true", default=False)
args = parser.parse_args(argv)
app = setup(args)
app.run(port=args.port, debug=args.debug)
if __name__ == "__main__":
main(sys.argv[1:])