fix(serve): fix species column in refchef-serve flask app

compbiocore · Aug 26, 2019 · 9b32cc5 · 9b32cc5
1 parent bec3460
commit 9b32cc5
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Showing 2 changed files with 3 additions and 3 deletions.
diff --git a/scripts/refchef-serve b/scripts/refchef-serve
@@ -8,7 +8,7 @@ from refchef import config
 
 parser = argparse.ArgumentParser(description='Get and filter references available in the system.')
 
-parser.add_argument('--master', '-m', type=str, help='Path do to master.yaml')
+parser.add_argument('--master', '-f', type=str, help='Path do to master.yaml')
 parser.add_argument('--config', '-c', type=str, help='Path do to config file in .yaml or .ini format.')
 
 arguments = parser.parse_args()

diff --git a/scripts/templates/table.html b/scripts/templates/table.html
@@ -99,7 +99,7 @@ <h1 class="title">{{ title }}</h1>
               <input type="text" id="referenceInput" list="references" onkeyup="search('referenceInput', 0)" placeholder="Reference">
             </th>
             <th>
-              <input type="text" id="speciesInput" list="species" onkeyup="search('speciesInput', 1)" placeholder="Species">
+              <input type="text" id="speciesInput" list="species" onkeyup="search('speciesInput', 1)" placeholder="Organism">
             </th>
             <th>
               <input type="text" id="orgInput" list="organizations" onkeyup="search('orgInput', 2)" placeholder="Organization">
@@ -120,7 +120,7 @@ <h1 class="title">{{ title }}</h1>
           {% for entry in items %}
           <tr>
             <td><p>{{ entry.name }}</p></td>
-            <td><p>{{ entry.species }}</p></td>
+            <td><p>{{ entry.organism }}</p></td>
             <td><p>{{ entry.organization }}</p></td>
             <td><p>{{ entry.component }}</p></td>
             <td><code>{{ entry.location }}</code></td>