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lyx-journal-example.lyx
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lyx-journal-example.lyx
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#LyX 2.0 created this file. For more info see http://www.lyx.org/
\lyxformat 413
\begin_document
\begin_header
\textclass csm-thesis
\begin_preamble
% Uncomment for automatic equation breaking:
%\usepackage{breqn}
\end_preamble
\options letterpaper
\use_default_options false
\maintain_unincluded_children false
\language english
\language_package default
\inputencoding utf8
\fontencoding global
\font_roman default
\font_sans default
\font_typewriter default
\font_default_family default
\use_non_tex_fonts false
\font_sc false
\font_osf false
\font_sf_scale 100
\font_tt_scale 100
\graphics default
\default_output_format default
\output_sync 0
\bibtex_command default
\index_command default
\paperfontsize 12
\spacing single
\use_hyperref true
\pdf_bookmarks true
\pdf_bookmarksnumbered false
\pdf_bookmarksopen false
\pdf_bookmarksopenlevel 1
\pdf_breaklinks false
\pdf_pdfborder false
\pdf_colorlinks false
\pdf_backref false
\pdf_pdfusetitle true
\papersize default
\use_geometry false
\use_amsmath 1
\use_esint 1
\use_mhchem 1
\use_mathdots 1
\cite_engine natbib_numerical
\use_bibtopic true
\use_indices false
\paperorientation portrait
\suppress_date false
\use_refstyle 0
\index Index
\shortcut idx
\color #008000
\end_index
\secnumdepth 4
\tocdepth 4
\paragraph_separation indent
\paragraph_indentation default
\quotes_language english
\papercolumns 1
\papersides 2
\paperpagestyle default
\tracking_changes false
\output_changes false
\html_math_output 0
\html_css_as_file 0
\html_be_strict false
\end_header
\begin_body
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
% Parts of a Thesis
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
%% Parts of a Thesis - Front Matter
\end_layout
\end_inset
\end_layout
\begin_layout --FrontMatter--
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
%%% Parts of a Thesis - Front Matter - Title Page (required)
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
% VERY IMPORTANT NOTE:
\end_layout
\begin_layout Plain Layout
% In LyX you must use Ctrl+Enter (Apple+Enter on Mac) to make multi-line
titles!
\end_layout
\begin_layout Plain Layout
% Note that if you make a multi-line title manually then the thesis style
will not attempt to make the title into an inverted pyramid.
\end_layout
\end_inset
\end_layout
\begin_layout Title
Developing a
\begin_inset ERT
status open
\begin_layout Plain Layout
\backslash
atom{12}{6}{Th}{2+}{3}
\end_layout
\end_inset
esis Template to Help Students Graduate in a Reasonable Time
\end_layout
\begin_layout Author
Graduate A.
Student
\end_layout
\begin_layout Standard
\begin_inset Newpage newpage
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
%%% Parts of a Thesis - Front Matter - Copyright Page (optional)
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
% If the copyright for your document spans multiple years, or does not match
the current year, then replace ''
\backslash
the
\backslash
year`` below with the appropriate text.
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset ERT
status open
\begin_layout Plain Layout
\backslash
makecopyright{
\backslash
the
\backslash
year}
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Newpage newpage
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
%%% Parts of a Thesis - Front Matter - Signature Page (required)
\end_layout
\end_inset
\end_layout
\begin_layout Degree
Master of Science
\end_layout
\begin_layout Discipline
Engineering Systems
\end_layout
\begin_layout Department
Engineering
\end_layout
\begin_layout Advisor
Dr.
Primary A.
Advisor
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
Remove the following line if you do not have a co-advisor:
\end_layout
\end_inset
\end_layout
\begin_layout Co-Advisor
Dr.
Secondary B.
Advisor
\end_layout
\begin_layout DepartmentHeadName
Dr.
Big Boss
\end_layout
\begin_layout DepartmentHeadTitle
Professor and Head
\end_layout
\begin_layout -SubmittalPage-
\end_layout
\begin_layout Standard
\begin_inset Newpage newpage
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
%%% Parts of a Thesis - Front Matter - Abstract (required)
\end_layout
\end_inset
\end_layout
\begin_layout Abstract
Lorem ipsum dolor sit amet, consectetur adipiscing elit.
In felis sapien, fermentum vel varius id, ullamcorper dapibus elit.
Integer in massa sed ipsum placerat posuere.
Quisque quis metus turpis.
Curabitur vel metus a libero gravida posuere.
Class aptent taciti sociosqu ad litora torquent per conubia nostra, per
inceptos himenaeos.
Integer accumsan dapibus tellus at venenatis.
Fusce id neque massa.
Pellentesque sodales nisl non est tincidunt molestie.
Vestibulum eu orci sed elit dictum interdum quis ac turpis.
Etiam id eros elit, id interdum nibh.
Donec porttitor tempor dolor nec dignissim.
Class aptent taciti sociosqu ad litora torquent per conubia nostra, per
inceptos himenaeos.
Pellentesque habitant morbi tristique senectus et netus et malesuada fames
ac turpis egestas.
\end_layout
\begin_layout Abstract
Nullam gravida aliquam felis, eget cursus quam ullamcorper quis.
Vivamus a leo velit, ut tempor tortor.
Maecenas dapibus nulla sed magna sollicitudin laoreet.
Donec adipiscing facilisis ornare.
Maecenas ultrices convallis tellus, vel blandit felis tincidunt non.
Nulla risus turpis, volutpat nec posuere a, molestie sed eros.
Suspendisse elementum mi sit amet lacus sagittis vestibulum.
Morbi ornare congue ipsum non lacinia.
Suspendisse id risus nec felis fermentum malesuada id at ante.
Nunc ullamcorper, tellus quis tincidunt tincidunt, nibh mi commodo lacus,
in condimentum ligula quam et mauris.
Duis eu est non tellus condimentum blandit sit amet eu tortor.
Cras tempor lacus ac lacus tempus lacinia.
Phasellus dignissim justo a erat ullamcorper suscipit.
Donec nec quam in nulla consequat porttitor.
Quisque bibendum diam blandit justo dictum nec tincidunt augue blandit.
Etiam nisi diam, hendrerit in rhoncus in, rhoncus et risus.
\end_layout
\begin_layout Abstract
Praesent ultricies rhoncus dui, sed porta magna tincidunt a.
Mauris ligula justo, malesuada eu cursus convallis, facilisis a justo.
Quisque ut mauris sit amet quam tincidunt cursus pellentesque sed sapien.
Fusce luctus ultrices lorem, ut elementum odio sodales id.
Nullam eu sem tincidunt justo scelerisque interdum in eu dolor.
Mauris ut leo in magna pretium hendrerit id quis lacus.
Phasellus volutpat sapien et velit molestie rhoncus.
Class aptent taciti sociosqu ad litora torquent per conubia nostra, per
inceptos himenaeos.
Donec quis eros vitae elit fringilla malesuada ultricies et ligula.
Donec enim purus, cursus sit amet consectetur ut, faucibus vitae magna.
Etiam ac lorem sed nulla condimentum viverra sed id nunc.
Suspendisse potenti.
Praesent aliquam elit sed turpis hendrerit euismod.
\end_layout
\begin_layout Abstract
Sed mauris sapien, sagittis eu ultricies vitae, molestie eu dolor.
Maecenas massa risus, sollicitudin a sollicitudin id, sollicitudin sit
amet mi.
Phasellus a eleifend odio.
Nullam vel metus magna, eget tincidunt lectus.
Vestibulum vestibulum viverra ante, cursus luctus tortor tristique id.
In lobortis convallis turpis, auctor ultricies nisi blandit ac.
Cras id rutrum magna.
Nullam tristique tincidunt enim aliquam sagittis.
Duis ornare, eros at congue hendrerit, lectus augue viverra sem, congue
tempor diam enim vel neque.
Maecenas scelerisque iaculis metus in vulputate.
Nam vestibulum, est vel imperdiet vulputate, nisl felis vestibulum felis,
quis hendrerit sem erat nec arcu.
Nam eget congue lacus.
Lorem ipsum dolor sit amet, consectetur adipiscing elit.
Maecenas posuere luctus ligula sit amet ornare.
Pellentesque vitae velit nulla.
Ut a turpis massa, id ullamcorper odio.
\end_layout
\begin_layout Abstract
Quisque malesuada pharetra imperdiet.
Suspendisse lobortis posuere faucibus.
In convallis, justo in sollicitudin pulvinar, sapien neque imperdiet dolor,
ac congue lorem enim eget lectus.
Cras nibh magna, malesuada vitae sagittis non, accumsan sed ipsum.
Nulla id tellus id tellus posuere tempor venenatis et magna.
Etiam interdum facilisis orci, eget varius justo vulputate sit amet.
Vivamus tortor quam, fermentum sit amet dictum sit amet, feugiat ac purus.
Aliquam erat volutpat.
Vivamus sit amet libero dolor.
Phasellus venenatis, enim a aliquet euismod, purus mauris ullamcorper lectus,
sed imperdiet eros tellus eget libero.
Nulla non purus sit amet nisl pulvinar.
\end_layout
\begin_layout Standard
\begin_inset Newpage newpage
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
%%% Parts of a Thesis - Front Matter - Table of Contents (required)
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset CommandInset toc
LatexCommand tableofcontents
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Newpage newpage
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
%%% Parts of a Thesis - Front Matter - List of Figures (if applicable)
\end_layout
\begin_layout Plain Layout
%%% Parts of a Thesis - Front Matter - List of Tables (if applicable)
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
% NOTE: If you have more than 2 items in either list they must be separate.
\end_layout
\begin_layout Plain Layout
% This case is generally handled automatically, but if you are told to separate
the lists then comment or remove the line below:
\end_layout
\end_inset
\end_layout
\begin_layout -ListOfFiguresAndTables-
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
% ...
and then uncomment these lines to force separate lists:
\end_layout
\begin_layout -ListOfFigures-
\end_layout
\begin_layout Plain Layout
\begin_inset Newpage newpage
\end_inset
\end_layout
\begin_layout -ListOfTables-
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Newpage newpage
\end_inset
\begin_inset Note Comment
status open
\begin_layout Plain Layout
%%% Parts of a Thesis - Front Matter - List of Symbols (if applicable)
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
% Place this call (uncomment) before
\begin_inset Quotes eld
\end_inset
\backslash
listofsymbols
\begin_inset Quotes erd
\end_inset
to make the symbols appear on the left instead of the right:
\end_layout
\begin_layout Plain Layout
\begin_inset ERT
status open
\begin_layout Plain Layout
\backslash
ShowSymbolFirst
\end_layout
\end_inset
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
% To call the
\begin_inset Quotes eld
\end_inset
List of Symbols
\begin_inset Quotes erd
\end_inset
\begin_inset Quotes eld
\end_inset
Nomenclature
\begin_inset Quotes erd
\end_inset
instead add (uncomment):
\end_layout
\begin_layout Plain Layout
\begin_inset ERT
status open
\begin_layout Plain Layout
\backslash
renewcommand{
\backslash
listsymbolname}{Nomenclature}
\end_layout
\end_inset
\end_layout
\end_inset
\end_layout
\begin_layout -ListOfSymbols-
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
% With very large symbol lists it is sometimes good to split the list into
multiple sub-lists.
To output the lists just use the extended
\backslash
listofsymbols command (below) and to add an element to the list use the
optional parameter to ''
\backslash
addsymbol``.
\end_layout
\begin_layout -ListOfSymbols-
General Nomenclature
\end_layout
\begin_layout -ListOfSymbols-
Greek Letters
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
% Note that you may define symbols anywhere in the document, when you re-run
LaTeX they
\end_layout
\begin_layout Plain Layout
% will be added to the list (just like all other lists)
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
% Note for LyX users, there are two ways to define symbols:
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
% (1) Built-in LyX nomenclature command:
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset CommandInset nomenclature
LatexCommand nomenclature
symbol "$\\alpha_c$"
description "absorption coefficient"
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Note Comment
status open
\begin_layout Plain Layout
% (2) Custom
\begin_inset Quotes eld
\end_inset
addsymbol
\begin_inset Quotes erd
\end_inset
command, the recommend method (allows simple copy-paste):
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset ERT
status open
\begin_layout Plain Layout
\backslash
addsymbol{
\end_layout
\end_inset
absorption cross section
\begin_inset ERT
status open
\begin_layout Plain Layout
}{
\end_layout
\end_inset
\begin_inset Formula $\alpha_{\sigma}$
\end_inset
\begin_inset ERT
status open
\begin_layout Plain Layout
}
\end_layout
\end_inset
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\begin_layout Standard
\begin_inset ERT
status open
\begin_layout Plain Layout
\backslash
addsymbol{
\end_layout
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average radius of cylindrical shell
\begin_inset ERT
status open
\begin_layout Plain Layout
}{
\end_layout
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\begin_inset Formula $c$
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\begin_layout Plain Layout
}
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\end_layout
\begin_layout Standard
\begin_inset ERT
status open
\begin_layout Plain Layout
\backslash
addsymbol{
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\end_inset
activation energy of oxidation reaction of a-C in excited state
\begin_inset ERT
status open
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}{
\end_layout
\end_inset
\begin_inset Formula $E_{act}^{\ast}$
\end_inset
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status open
\begin_layout Plain Layout
}
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Note Comment
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% Example for sub-list symbols (optional parameter specifies which list
to use):
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\begin_inset ERT
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\begin_layout Plain Layout
\backslash
addsymbol[General Nomenclature]{
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absorption coefficient
\begin_inset ERT
status open
\begin_layout Plain Layout
}{
\end_layout
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\begin_inset Formula $\alpha_{c}$
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status open
\begin_layout Plain Layout
}
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\end_inset
\end_layout
\begin_layout Plain Layout
\begin_inset ERT
status open
\begin_layout Plain Layout
\backslash
addsymbol[General Nomenclature]{
\end_layout
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absorption cross section
\begin_inset ERT
status open
\begin_layout Plain Layout
}{
\end_layout
\end_inset
\begin_inset Formula $\alpha_{\sigma}$
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status open
\begin_layout Plain Layout
}
\end_layout
\end_inset
\end_layout
\begin_layout Plain Layout
\begin_inset ERT
status open
\begin_layout Plain Layout
\backslash
addsymbol[Greek Letters]{
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average radius of cylindrical shell
\begin_inset ERT
status open
\begin_layout Plain Layout
}{
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\begin_inset Formula $c$
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status open
\begin_layout Plain Layout
}
\end_layout
\end_inset
\end_layout
\begin_layout Plain Layout
\begin_inset ERT
status open
\begin_layout Plain Layout
\backslash
addsymbol[Greek Letters]{
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activation energy of oxidation reaction of a-C in excited state
\begin_inset ERT
status open