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Add Watershed Segmentation Functionality #160

Merged
merged 4 commits into from
Oct 23, 2023
Merged

Add Watershed Segmentation Functionality #160

merged 4 commits into from
Oct 23, 2023

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anwai98
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@anwai98 anwai98 commented Oct 21, 2023

  • Add two watershed segmentation (from components and from maxima of distance transform)
  • (WIP) Test them on UNETR predictions on LiveCell

@anwai98 anwai98 marked this pull request as ready for review October 22, 2023 17:38
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anwai98 commented Oct 22, 2023

The updated results for the instance segmentation are here

constantinpape
constantinpape approved these changes Oct 23, 2023
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Ok, and this shows the advantage of the SAM initialized model much more!

@constantinpape constantinpape merged commit 38f2096 into constantinpape:main Oct 23, 2023
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@anwai98 anwai98 deleted the aa-ws branch November 8, 2023 00:00
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