Skip to content

Commit

Permalink
updating getting started
Browse files Browse the repository at this point in the history
  • Loading branch information
cornhundred committed Jul 18, 2019
1 parent 997eda2 commit 74bdfa1
Show file tree
Hide file tree
Showing 6 changed files with 7 additions and 7 deletions.
Binary file modified docs/_build_html/.doctrees/environment.pickle
Binary file not shown.
Binary file modified docs/_build_html/.doctrees/getting_started.doctree
Binary file not shown.
4 changes: 2 additions & 2 deletions docs/_build_html/_sources/getting_started.rst.txt
Original file line number Diff line number Diff line change
Expand Up @@ -3,13 +3,13 @@
Getting Started
---------------

Clustergrammer is a web-based tool for visualizing and analyzing high-dimensional data as interactive and shareable hierarchically clustered heatmaps (see :ref:`intro_heatmap_clustergram`). This section will provide information on how to interact with the visualization and how to quickly visualize your own data using the :ref:`clustergrammer_web`, :ref:`clustergrammer_widget` and :ref:`clustergrammer2`.
Clustergrammer is a web-based tool for visualizing and analyzing high-dimensional data as interactive and shareable hierarchically clustered heatmaps (see :ref:`intro_heatmap_clustergram`). This section will provide information on how to interact with the visualization and how to quickly visualize your own data using the :ref:`clustergrammer_web`, :ref:`clustergrammer2`, and :ref:`clustergrammer_widget`.

See :ref:`case_studies` for examples of how Clustergrammer can be used to explore and analyze real world data. For developers interested in building their own web page using Clustergrammer, please refer to the :ref:`building_web_page` section.

Using Clustergrammer
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Clustergrammer can be used as a web application :ref:`clustergrammer_web`, Jupyter Widgets (:ref:`clustergrammer2` and :ref:`clustergrammer_widget`) or stand alone JavaScript libraries (:ref:`clustergrammer_gl` and :ref:`clustergrammer_js`). The newer :ref:`clustergrammer2` and `clustergrammer_gl` libraries are built to handle larger datasets such as scRNA-seq data.
Clustergrammer can be used as a web application :ref:`clustergrammer_web`, a Jupyter Widget (:ref:`clustergrammer2` and :ref:`clustergrammer_widget`) or stand alone JavaScript libraries (:ref:`clustergrammer_gl` and :ref:`clustergrammer_js`). The newer :ref:`clustergrammer2` and :ref:`clustergrammer_gl` libraries are built to handle larger datasets such as scRNA-seq data.


scRNA-seq 2,700 PBMC Clustergrammer2 Example
Expand Down
4 changes: 2 additions & 2 deletions docs/_build_html/getting_started.html
Original file line number Diff line number Diff line change
Expand Up @@ -175,11 +175,11 @@

<div class="section" id="getting-started">
<span id="id1"></span><h1>Getting Started<a class="headerlink" href="#getting-started" title="Permalink to this headline"></a></h1>
<p>Clustergrammer is a web-based tool for visualizing and analyzing high-dimensional data as interactive and shareable hierarchically clustered heatmaps (see <a class="reference internal" href="interacting_with_viz.html#intro-heatmap-clustergram"><span class="std std-ref">Introduction to Clustergrams</span></a>). This section will provide information on how to interact with the visualization and how to quickly visualize your own data using the <a class="reference internal" href="clustergrammer_web.html#clustergrammer-web"><span class="std std-ref">Clustergrammer-Web</span></a>, <a class="reference internal" href="clustergrammer_widget.html#clustergrammer-widget"><span class="std std-ref">Clustergrammer-Widget</span></a> and <a class="reference internal" href="clustergrammer2.html#clustergrammer2"><span class="std std-ref">Clustergrammer2</span></a>.</p>
<p>Clustergrammer is a web-based tool for visualizing and analyzing high-dimensional data as interactive and shareable hierarchically clustered heatmaps (see <a class="reference internal" href="interacting_with_viz.html#intro-heatmap-clustergram"><span class="std std-ref">Introduction to Clustergrams</span></a>). This section will provide information on how to interact with the visualization and how to quickly visualize your own data using the <a class="reference internal" href="clustergrammer_web.html#clustergrammer-web"><span class="std std-ref">Clustergrammer-Web</span></a>, <a class="reference internal" href="clustergrammer2.html#clustergrammer2"><span class="std std-ref">Clustergrammer2</span></a>, and <a class="reference internal" href="clustergrammer_widget.html#clustergrammer-widget"><span class="std std-ref">Clustergrammer-Widget</span></a>.</p>
<p>See <a class="reference internal" href="case_studies.html#case-studies"><span class="std std-ref">Case Studies and Tutorials</span></a> for examples of how Clustergrammer can be used to explore and analyze real world data. For developers interested in building their own web page using Clustergrammer, please refer to the <a class="reference internal" href="building_webpage.html#building-web-page"><span class="std std-ref">Web-Development</span></a> section.</p>
<div class="section" id="using-clustergrammer">
<h2>Using Clustergrammer<a class="headerlink" href="#using-clustergrammer" title="Permalink to this headline"></a></h2>
<p>Clustergrammer can be used as a web application <a class="reference internal" href="clustergrammer_web.html#clustergrammer-web"><span class="std std-ref">Clustergrammer-Web</span></a>, Jupyter Widgets (<a class="reference internal" href="clustergrammer2.html#clustergrammer2"><span class="std std-ref">Clustergrammer2</span></a> and <a class="reference internal" href="clustergrammer_widget.html#clustergrammer-widget"><span class="std std-ref">Clustergrammer-Widget</span></a>) or stand alone JavaScript libraries (<a class="reference internal" href="clustergrammer_gl.html#clustergrammer-gl"><span class="std std-ref">Clustergrammer-GL</span></a> and <a class="reference internal" href="clustergrammer_js.html#clustergrammer-js"><span class="std std-ref">Clustergrammer-JS</span></a>). The newer <a class="reference internal" href="clustergrammer2.html#clustergrammer2"><span class="std std-ref">Clustergrammer2</span></a> and <cite>clustergrammer_gl</cite> libraries are built to handle larger datasets such as scRNA-seq data.</p>
<p>Clustergrammer can be used as a web application <a class="reference internal" href="clustergrammer_web.html#clustergrammer-web"><span class="std std-ref">Clustergrammer-Web</span></a>, a Jupyter Widget (<a class="reference internal" href="clustergrammer2.html#clustergrammer2"><span class="std std-ref">Clustergrammer2</span></a> and <a class="reference internal" href="clustergrammer_widget.html#clustergrammer-widget"><span class="std std-ref">Clustergrammer-Widget</span></a>) or stand alone JavaScript libraries (<a class="reference internal" href="clustergrammer_gl.html#clustergrammer-gl"><span class="std std-ref">Clustergrammer-GL</span></a> and <a class="reference internal" href="clustergrammer_js.html#clustergrammer-js"><span class="std std-ref">Clustergrammer-JS</span></a>). The newer <a class="reference internal" href="clustergrammer2.html#clustergrammer2"><span class="std std-ref">Clustergrammer2</span></a> and <a class="reference internal" href="clustergrammer_gl.html#clustergrammer-gl"><span class="std std-ref">Clustergrammer-GL</span></a> libraries are built to handle larger datasets such as scRNA-seq data.</p>
</div>
<div class="section" id="scrna-seq-2-700-pbmc-clustergrammer2-example">
<h2>scRNA-seq 2,700 PBMC Clustergrammer2 Example<a class="headerlink" href="#scrna-seq-2-700-pbmc-clustergrammer2-example" title="Permalink to this headline"></a></h2>
Expand Down
2 changes: 1 addition & 1 deletion docs/_build_html/searchindex.js

Large diffs are not rendered by default.

4 changes: 2 additions & 2 deletions docs/getting_started.rst
Original file line number Diff line number Diff line change
Expand Up @@ -3,13 +3,13 @@
Getting Started
---------------

Clustergrammer is a web-based tool for visualizing and analyzing high-dimensional data as interactive and shareable hierarchically clustered heatmaps (see :ref:`intro_heatmap_clustergram`). This section will provide information on how to interact with the visualization and how to quickly visualize your own data using the :ref:`clustergrammer_web`, :ref:`clustergrammer_widget` and :ref:`clustergrammer2`.
Clustergrammer is a web-based tool for visualizing and analyzing high-dimensional data as interactive and shareable hierarchically clustered heatmaps (see :ref:`intro_heatmap_clustergram`). This section will provide information on how to interact with the visualization and how to quickly visualize your own data using the :ref:`clustergrammer_web`, :ref:`clustergrammer2`, and :ref:`clustergrammer_widget`.

See :ref:`case_studies` for examples of how Clustergrammer can be used to explore and analyze real world data. For developers interested in building their own web page using Clustergrammer, please refer to the :ref:`building_web_page` section.

Using Clustergrammer
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Clustergrammer can be used as a web application :ref:`clustergrammer_web`, Jupyter Widgets (:ref:`clustergrammer2` and :ref:`clustergrammer_widget`) or stand alone JavaScript libraries (:ref:`clustergrammer_gl` and :ref:`clustergrammer_js`). The newer :ref:`clustergrammer2` and `clustergrammer_gl` libraries are built to handle larger datasets such as scRNA-seq data.
Clustergrammer can be used as a web application :ref:`clustergrammer_web`, a Jupyter Widget (:ref:`clustergrammer2` and :ref:`clustergrammer_widget`) or stand alone JavaScript libraries (:ref:`clustergrammer_gl` and :ref:`clustergrammer_js`). The newer :ref:`clustergrammer2` and :ref:`clustergrammer_gl` libraries are built to handle larger datasets such as scRNA-seq data.


scRNA-seq 2,700 PBMC Clustergrammer2 Example
Expand Down

0 comments on commit 74bdfa1

Please sign in to comment.