added gif to index/getting started

docs/_build_html/_sources/getting_started.rst.txt

@@ -9,6 +9,9 @@ Clustergrammer is a web-based tool for visualizing and analyzing high-dimensiona
 
 This section will provide information on how to interact with the visualization and how to quickly visualize your own data using the :ref:`clustergrammer_web` and the :ref:`clustergrammer_widget`. See :ref:`case_studies` for examples of how Clustergrammer can be used to explore and analyze real world data. For developers interested in building their own web page using Clustergrammer, please refer to the :ref:`building_web_page` section.
 
+What's New
+-----------
+
 JupyterCon 2018
 ===============
 
@@ -19,10 +22,17 @@ JupyterCon 2018
          <iframe width="560" height="315" src="https://www.youtube.com/embed/82epZkmfkrE" frameborder="0" allow="autoplay; encrypted-media" allowfullscreen></iframe>
          </div>
 
-Clustergrammer-Widget was recently presented at JupyterCon 2018.
+The Clustergrammer-Widget was recently presented at JupyterCon 2018.
+
+Clustergrammer2
+===============
+
+.. figure:: _static/clustergrammer2_480px.gif
+  :width: 800px
+  :align: left
+  :alt: demo GIF
+  :target: https://github.com/ismms-himc/clustergrammer2-examples
 
-What's New?
-===========
 Clustergrammer is currently being re-built using the WebGL library `regl`_:
 
 * :ref:`clustergrammer_gl`: WebGL JavaScript Library

docs/_build_html/_sources/index.rst.txt

@@ -10,6 +10,9 @@ Clustergrammer is a web-based tool for visualizing and analyzing high-dimensiona
 
 Press play or interact with the gene-expression demo above to see some of Clustergrammer's interactive features and refer to :ref:`interacting_with_viz` for more information.
 
+What's New
+-----------
+
 JupyterCon 2018
 ===============
 
@@ -22,8 +25,15 @@ JupyterCon 2018
 
 The Clustergrammer-Widget was recently presented at JupyterCon 2018.
 
-What's New?
-===========
+Clustergrammer2
+===============
+
+.. figure:: _static/clustergrammer2_480px.gif
+  :width: 800px
+  :align: left
+  :alt: demo GIF
+  :target: https://github.com/ismms-himc/clustergrammer2-examples
+
 Clustergrammer is currently being re-built using the WebGL library `regl`_:
 
 * :ref:`clustergrammer_gl`: WebGL JavaScript Library

docs/_build_html/genindex.html

@@ -84,6 +84,7 @@
 
               <ul>
 <li class="toctree-l1"><a class="reference internal" href="getting_started.html">Getting Started</a></li>
+<li class="toctree-l1"><a class="reference internal" href="getting_started.html#what-s-new">What’s New</a></li>
 <li class="toctree-l1"><a class="reference internal" href="clustergrammer_web.html">Clustergrammer Web App</a></li>
 <li class="toctree-l1"><a class="reference internal" href="clustergrammer_widget.html">Clustergrammer Jupyter Widget</a></li>
 <li class="toctree-l1"><a class="reference internal" href="clustergrammer2.html">Clustergrammer2 Jupyter Widget</a></li>

docs/_build_html/index.html

@@ -84,6 +84,7 @@
 
               <ul>
 <li class="toctree-l1"><a class="reference internal" href="getting_started.html">Getting Started</a></li>
+<li class="toctree-l1"><a class="reference internal" href="getting_started.html#what-s-new">What’s New</a></li>
 <li class="toctree-l1"><a class="reference internal" href="clustergrammer_web.html">Clustergrammer Web App</a></li>
 <li class="toctree-l1"><a class="reference internal" href="clustergrammer_widget.html">Clustergrammer Jupyter Widget</a></li>
 <li class="toctree-l1"><a class="reference internal" href="clustergrammer2.html">Clustergrammer2 Jupyter Widget</a></li>
@@ -166,15 +167,21 @@
 <h1>Welcome to Clustergrammer’s Documentation!<a class="headerlink" href="#welcome-to-clustergrammer-s-documentation" title="Permalink to this headline">¶</a></h1>
 <p>Clustergrammer is a web-based tool for visualizing and analyzing high-dimensional data as interactive and shareable hierarchically clustered heatmaps (see <a class="reference internal" href="interacting_with_viz.html#intro-heatmap-clustergram"><span class="std std-ref">Introduction to Clustergrams</span></a>). Clustergrammer’s front end (<a class="reference internal" href="clustergrammer_js.html#clustergrammer-js"><span class="std std-ref">Clustergrammer-JS</span></a>) is built using <a class="reference external" href="https://d3js.org/">D3.js</a> and its back end (<a class="reference internal" href="clustergrammer_py.html#clustergrammer-py"><span class="std std-ref">Clustergrammer-PY</span></a>) is built using <a class="reference external" href="https://www.python.org/">Python</a>. Clustergrammer produces highly interactive visualizations that enable intuitive exploration of high-dimensional data and has several optional biology-specific features (e.g. enrichment analysis; see <a class="reference internal" href="biology_specific_features.html#biology-specific-features"><span class="std std-ref">Biology-Specific Features</span></a>) to facilitate the exploration of gene-level biological data. The project is free and open-source and can be found on <a class="reference external" href="https://github.com/MaayanLab/clustergrammer">GitHub</a>.</p>
 <iframe id='iframe_preview' src="https://amp.pharm.mssm.edu/clustergrammer/demo/" frameBorder="0" style='height: 495px; width:730px; margin-bottom:20px;'></iframe><p>Press play or interact with the gene-expression demo above to see some of Clustergrammer’s interactive features and refer to <a class="reference internal" href="interacting_with_viz.html#interacting-with-viz"><span class="std std-ref">Interacting with the Visualization</span></a> for more information.</p>
+</div>
+<div class="section" id="what-s-new">
+<h1>What’s New<a class="headerlink" href="#what-s-new" title="Permalink to this headline">¶</a></h1>
 <div class="section" id="jupytercon-2018">
 <h2>JupyterCon 2018<a class="headerlink" href="#jupytercon-2018" title="Permalink to this headline">¶</a></h2>
 <div style="position: relative; padding-bottom: 10px; height: 0; overflow: hidden; max-width: 100%; height: auto;">
 
 <iframe width="560" height="315" src="https://www.youtube.com/embed/82epZkmfkrE" frameborder="0" allow="autoplay; encrypted-media" allowfullscreen></iframe>
 </div><p>The Clustergrammer-Widget was recently presented at JupyterCon 2018.</p>
 </div>
-<div class="section" id="what-s-new">
-<h2>What’s New?<a class="headerlink" href="#what-s-new" title="Permalink to this headline">¶</a></h2>
+<div class="section" id="clustergrammer2">
+<h2>Clustergrammer2<a class="headerlink" href="#clustergrammer2" title="Permalink to this headline">¶</a></h2>
+<div class="figure align-left">
+<a class="reference external image-reference" href="https://github.com/ismms-himc/clustergrammer2-examples"><img alt="demo GIF" src="_images/clustergrammer2_480px.gif" style="width: 800px;" /></a>
+</div>
 <p>Clustergrammer is currently being re-built using the WebGL library <a class="reference external" href="http://regl.party/">regl</a>:</p>
 <ul class="simple">
 <li><a class="reference internal" href="clustergrammer_gl.html#clustergrammer-gl"><span class="std std-ref">Clustergrammer-GL</span></a>: WebGL JavaScript Library</li>
@@ -226,9 +233,10 @@ <h2>Funding<a class="headerlink" href="#funding" title="Permalink to this headli
 <h2>Contents:<a class="headerlink" href="#contents" title="Permalink to this headline">¶</a></h2>
 <div class="toctree-wrapper compound">
 <ul>
-<li class="toctree-l1"><a class="reference internal" href="getting_started.html">Getting Started</a><ul>
+<li class="toctree-l1"><a class="reference internal" href="getting_started.html">Getting Started</a></li>
+<li class="toctree-l1"><a class="reference internal" href="getting_started.html#what-s-new">What’s New</a><ul>
 <li class="toctree-l2"><a class="reference internal" href="getting_started.html#jupytercon-2018">JupyterCon 2018</a></li>
-<li class="toctree-l2"><a class="reference internal" href="getting_started.html#what-s-new">What’s New?</a></li>
+<li class="toctree-l2"><a class="reference internal" href="getting_started.html#clustergrammer2">Clustergrammer2</a></li>
 <li class="toctree-l2"><a class="reference internal" href="getting_started.html#interacting-with-clustergrammer-heatmaps">Interacting with Clustergrammer Heatmaps</a></li>
 <li class="toctree-l2"><a class="reference internal" href="getting_started.html#clustergrammer-web-app">Clustergrammer Web-App</a></li>
 <li class="toctree-l2"><a class="reference internal" href="getting_started.html#clustergrammer-widget">Clustergrammer-Widget</a></li>

docs/_build_html/py-modindex.html

@@ -90,6 +90,7 @@
 
               <ul>
 <li class="toctree-l1"><a class="reference internal" href="getting_started.html">Getting Started</a></li>
+<li class="toctree-l1"><a class="reference internal" href="getting_started.html#what-s-new">What’s New</a></li>
 <li class="toctree-l1"><a class="reference internal" href="clustergrammer_web.html">Clustergrammer Web App</a></li>
 <li class="toctree-l1"><a class="reference internal" href="clustergrammer_widget.html">Clustergrammer Jupyter Widget</a></li>
 <li class="toctree-l1"><a class="reference internal" href="clustergrammer2.html">Clustergrammer2 Jupyter Widget</a></li>

docs/_build_html/search.html

@@ -83,6 +83,7 @@
 
               <ul>
 <li class="toctree-l1"><a class="reference internal" href="getting_started.html">Getting Started</a></li>
+<li class="toctree-l1"><a class="reference internal" href="getting_started.html#what-s-new">What’s New</a></li>
 <li class="toctree-l1"><a class="reference internal" href="clustergrammer_web.html">Clustergrammer Web App</a></li>
 <li class="toctree-l1"><a class="reference internal" href="clustergrammer_widget.html">Clustergrammer Jupyter Widget</a></li>
 <li class="toctree-l1"><a class="reference internal" href="clustergrammer2.html">Clustergrammer2 Jupyter Widget</a></li>

docs/getting_started.rst

@@ -9,6 +9,9 @@ Clustergrammer is a web-based tool for visualizing and analyzing high-dimensiona
 
 This section will provide information on how to interact with the visualization and how to quickly visualize your own data using the :ref:`clustergrammer_web` and the :ref:`clustergrammer_widget`. See :ref:`case_studies` for examples of how Clustergrammer can be used to explore and analyze real world data. For developers interested in building their own web page using Clustergrammer, please refer to the :ref:`building_web_page` section.
 
+What's New
+-----------
+
 JupyterCon 2018
 ===============
 
@@ -19,10 +22,17 @@ JupyterCon 2018
          <iframe width="560" height="315" src="https://www.youtube.com/embed/82epZkmfkrE" frameborder="0" allow="autoplay; encrypted-media" allowfullscreen></iframe>
          </div>
 
-Clustergrammer-Widget was recently presented at JupyterCon 2018.
+The Clustergrammer-Widget was recently presented at JupyterCon 2018.
+
+Clustergrammer2
+===============
+
+.. figure:: _static/clustergrammer2_480px.gif
+  :width: 800px
+  :align: left
+  :alt: demo GIF
+  :target: https://github.com/ismms-himc/clustergrammer2-examples
 
-What's New?
-===========
 Clustergrammer is currently being re-built using the WebGL library `regl`_:
 
 * :ref:`clustergrammer_gl`: WebGL JavaScript Library

docs/index.rst

@@ -10,6 +10,9 @@ Clustergrammer is a web-based tool for visualizing and analyzing high-dimensiona
 
 Press play or interact with the gene-expression demo above to see some of Clustergrammer's interactive features and refer to :ref:`interacting_with_viz` for more information.
 
+What's New
+-----------
+
 JupyterCon 2018
 ===============
 
@@ -22,8 +25,15 @@ JupyterCon 2018
 
 The Clustergrammer-Widget was recently presented at JupyterCon 2018.
 
-What's New?
-===========
+Clustergrammer2
+===============
+
+.. figure:: _static/clustergrammer2_480px.gif
+  :width: 800px
+  :align: left
+  :alt: demo GIF
+  :target: https://github.com/ismms-himc/clustergrammer2-examples
+
 Clustergrammer is currently being re-built using the WebGL library `regl`_:
 
 * :ref:`clustergrammer_gl`: WebGL JavaScript Library