adding dev section to clustergrammer2

cornhundred · Jul 12, 2019 · d05e0c5 · d05e0c5
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diff --git a/docs/_build_html/.doctrees/clustergrammer2.doctree b/docs/_build_html/.doctrees/clustergrammer2.doctree
diff --git a/docs/_build_html/.doctrees/environment.pickle b/docs/_build_html/.doctrees/environment.pickle
diff --git a/docs/_build_html/.doctrees/index.doctree b/docs/_build_html/.doctrees/index.doctree
diff --git a/docs/_build_html/_sources/clustergrammer2.rst.txt b/docs/_build_html/_sources/clustergrammer2.rst.txt
@@ -35,3 +35,16 @@ Check back soon for more updates.
     :alt: version
     :target: https://mybinder.org/v2/gh/ismms-himc/clustergrammer2_examples/master?filepath=notebooks%2F2.0_CCLE_Gene_Expression.ipynb
 
+
+
+.. _clustergrammer2_dev:
+
+Clustergrammer2 Widget Development
+===================================
+Clustergrammer2's source code can be found in the `Clustergrammer2 GitHub repo`_. Clustergrammer2 is built using the jupyter-widgets framework (using the `cookie cutter`_ template).
+
+Please :ref:`contact` Nicolas Fernandez and Avi Ma'ayan with questions or use the GitHub `issues`_ feature to report an issue.
+
+
+.. _`Clustergrammer2 GitHub repo`: https://github.com/ismms-himc/clustergrammer2
+.. _`cookie cutter`: https://github.com/jupyter-widgets/widget-ts-cookiecutter
diff --git a/docs/_build_html/_sources/index.rst.txt b/docs/_build_html/_sources/index.rst.txt
@@ -13,18 +13,6 @@ Press play or interact with the gene-expression demo above to see some of Cluste
 What's New
 -----------
 
-JupyterCon 2018
-===============
-
-.. raw:: html
-
-         <div style="position: relative; padding-bottom: 10px; height: 0; overflow: hidden; max-width: 100%; height: auto;">
-
-         <iframe width="560" height="315" src="https://www.youtube.com/embed/82epZkmfkrE" frameborder="0" allow="autoplay; encrypted-media" allowfullscreen></iframe>
-         </div>
-
-The Clustergrammer-Widget was recently presented at JupyterCon 2018.
-
 Clustergrammer2
 ===============
 
@@ -47,6 +35,18 @@ Try running the Clustergrammer2 Jupyter widget on MyBinder
 
 and see `Clustergrammer2-Examples`_.
 
+JupyterCon 2018
+===============
+
+.. raw:: html
+
+         <div style="position: relative; padding-bottom: 10px; height: 0; overflow: hidden; max-width: 100%; height: auto;">
+
+         <iframe width="560" height="315" src="https://www.youtube.com/embed/82epZkmfkrE" frameborder="0" allow="autoplay; encrypted-media" allowfullscreen></iframe>
+         </div>
+
+The Clustergrammer-Widget was presented at JupyterCon 2018.
+
 Using Clustergrammer
 ====================
 
@@ -98,9 +98,9 @@ Contents:
    getting_started
    clustergrammer_web
    clustergrammer2
+   case_studies
    interacting_with_viz
    biology_specific_features
-   case_studies
    matrix_format_io
    building_webpage
    clustergrammer_widget

diff --git a/docs/_build_html/clustergrammer2.html b/docs/_build_html/clustergrammer2.html
@@ -29,7 +29,7 @@
   <link rel="stylesheet" href="https://unpkg.com/font-awesome@4.5.0/css/font-awesome.min.css" type="text/css" />
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" />
-    <link rel="next" title="Interacting with the Visualization" href="interacting_with_viz.html" />
+    <link rel="next" title="Case Studies and Tutorials" href="case_studies.html" />
     <link rel="prev" title="Clustergrammer Web App" href="clustergrammer_web.html" /> 
 
 
@@ -86,10 +86,13 @@
               <ul class="current">
 <li class="toctree-l1"><a class="reference internal" href="getting_started.html">Getting Started</a></li>
 <li class="toctree-l1"><a class="reference internal" href="clustergrammer_web.html">Clustergrammer Web App</a></li>
-<li class="toctree-l1 current"><a class="current reference internal" href="#">Clustergrammer2 Widget</a></li>
+<li class="toctree-l1 current"><a class="current reference internal" href="#">Clustergrammer2 Widget</a><ul>
+<li class="toctree-l2"><a class="reference internal" href="#clustergrammer2-widget-development">Clustergrammer2 Widget Development</a></li>
+</ul>
+</li>
+<li class="toctree-l1"><a class="reference internal" href="case_studies.html">Case Studies and Tutorials</a></li>
 <li class="toctree-l1"><a class="reference internal" href="interacting_with_viz.html">Interacting with the Visualization</a></li>
 <li class="toctree-l1"><a class="reference internal" href="biology_specific_features.html">Biology-Specific Features</a></li>
-<li class="toctree-l1"><a class="reference internal" href="case_studies.html">Case Studies and Tutorials</a></li>
 <li class="toctree-l1"><a class="reference internal" href="matrix_format_io.html">Matrix Formats and Input/Output</a></li>
 <li class="toctree-l1"><a class="reference internal" href="building_webpage.html">Web-Development with Clustergrammer</a></li>
 <li class="toctree-l1"><a class="reference internal" href="clustergrammer_widget.html">Clustergrammer-Widget</a></li>
@@ -175,6 +178,11 @@
 <p><a class="reference external" href="https://mybinder.org/v2/gh/ismms-himc/clustergrammer2_examples/master?filepath=notebooks%2F2.0_CCLE_Gene_Expression.ipynb"><img alt="version" src="https://img.shields.io/badge/launch-2.0%20CCLE%20Gene%20Expression-579ACA.svg?logo=data:image/png;base64,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" /></a></p>
 <p>and see <a class="reference external" href="https://github.com/ismms-himc/clustergrammer2-examples">Clustergrammer2-Examples</a></p>
 <p>Check back soon for more updates.</p>
+<div class="section" id="clustergrammer2-widget-development">
+<span id="clustergrammer2-dev"></span><h2>Clustergrammer2 Widget Development<a class="headerlink" href="#clustergrammer2-widget-development" title="Permalink to this headline">¶</a></h2>
+<p>Clustergrammer2’s source code can be found in the <a class="reference external" href="https://github.com/ismms-himc/clustergrammer2">Clustergrammer2 GitHub repo</a>. Clustergrammer2 is built using the jupyter-widgets framework (using the <a class="reference external" href="https://github.com/jupyter-widgets/widget-ts-cookiecutter">cookie cutter</a> template).</p>
+<p>Please <a class="reference internal" href="index.html#contact"><span class="std std-ref">Contact</span></a> Nicolas Fernandez and Avi Ma’ayan with questions or use the GitHub <a href="#id1"><span class="problematic" id="id2">`issues`_</span></a> feature to report an issue.</p>
+</div>
 </div>
 
 
@@ -185,7 +193,7 @@
 
     <div class="rst-footer-buttons" role="navigation" aria-label="footer navigation">
 
-        <a href="interacting_with_viz.html" class="btn btn-neutral float-right" title="Interacting with the Visualization" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right"></span></a>
+        <a href="case_studies.html" class="btn btn-neutral float-right" title="Case Studies and Tutorials" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right"></span></a>
 
 
         <a href="clustergrammer_web.html" class="btn btn-neutral" title="Clustergrammer Web App" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left"></span> Previous</a>

diff --git a/docs/_build_html/genindex.html b/docs/_build_html/genindex.html
@@ -86,9 +86,9 @@
 <li class="toctree-l1"><a class="reference internal" href="getting_started.html">Getting Started</a></li>
 <li class="toctree-l1"><a class="reference internal" href="clustergrammer_web.html">Clustergrammer Web App</a></li>
 <li class="toctree-l1"><a class="reference internal" href="clustergrammer2.html">Clustergrammer2 Widget</a></li>
+<li class="toctree-l1"><a class="reference internal" href="case_studies.html">Case Studies and Tutorials</a></li>
 <li class="toctree-l1"><a class="reference internal" href="interacting_with_viz.html">Interacting with the Visualization</a></li>
 <li class="toctree-l1"><a class="reference internal" href="biology_specific_features.html">Biology-Specific Features</a></li>
-<li class="toctree-l1"><a class="reference internal" href="case_studies.html">Case Studies and Tutorials</a></li>
 <li class="toctree-l1"><a class="reference internal" href="matrix_format_io.html">Matrix Formats and Input/Output</a></li>
 <li class="toctree-l1"><a class="reference internal" href="building_webpage.html">Web-Development with Clustergrammer</a></li>
 <li class="toctree-l1"><a class="reference internal" href="clustergrammer_widget.html">Clustergrammer-Widget</a></li>