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Added new lineage BA.1.9 with 309 new sequence designations
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@chrisruis
chrisruis committed Feb 16, 2022
1 parent fa65388 commit 05ec515
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1 change: 1 addition & 0 deletions lineage_notes.txt
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Expand Up @@ -602,6 +602,7 @@ BA.1.5 Alias of B.1.1.529.1.5, UK lineage
BA.1.6 Alias of B.1.1.529.1.6, Canada and Sint Maarten lineage
BA.1.7 Alias of B.1.1.529.1.7, UK lineage
BA.1.8 Alias of B.1.1.529.1.8, European lineage
BA.1.9 Alias of B.1.1.529.1.9, Brazil lineage
BA.2 Alias of B.1.1.529.2, from pango-designation issue #361
BA.3 Alias of B.1.1.529.3, from pango-designation issue #367
BB.2 Alias of B.1.621.1.2, from pango-designation issue #232
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309 changes: 309 additions & 0 deletions lineages.csv
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Expand Up @@ -1172439,3 +1172439,312 @@ Spain/CT-HUVH-E01291/2022,BA.1.8
Germany/BW-RKI-I-483349/2022,BA.1.8
Netherlands/FR-RIVM-77605/2021,BA.1.8
Germany/BW-RKI-I-484130/2022,BA.1.8
Scotland/QEUH-2FD639C/2021,BA.1.9
Scotland/QEUH-352AAE6/2022,BA.1.9
Scotland/NORW-3137892/2022,BA.1.9
Brazil/AM-FIOCRUZ-ILMD2202249/2022,BA.1.9
Brazil/AM-FIOCRUZ-ILMD2202436/2022,BA.1.9
Brazil/SP-IB_145980/2021,BA.1.9
Brazil/SP-IB_146378/2021,BA.1.9
Brazil/SP-IB_150435/2022,BA.1.9
Brazil/SP-IB_150198/2022,BA.1.9
Brazil/SP-IB_150515/2022,BA.1.9
Brazil/SP-IB_150407/2022,BA.1.9
Brazil/SP-IB_150504/2022,BA.1.9
Brazil/SP-IB_150387/2022,BA.1.9
Brazil/SP-IB_150260/2022,BA.1.9
Brazil/SP-IB_150253/2022,BA.1.9
Brazil/SP-IB_150241/2022,BA.1.9
Brazil/SP-IB_150293/2022,BA.1.9
Brazil/SP-IB_150272/2022,BA.1.9
Brazil/SP-IB_150284/2022,BA.1.9
Brazil/SP-IB_150294/2022,BA.1.9
Brazil/SP-IB_150381/2022,BA.1.9
Brazil/SP-IB_150309/2022,BA.1.9
Brazil/SP-IB_150317/2022,BA.1.9
Brazil/SP-IB_150299/2022,BA.1.9
Brazil/SP-IB_150319/2022,BA.1.9
Brazil/SP-IB_150302/2022,BA.1.9
Brazil/SP-IB_150303/2022,BA.1.9
Brazil/SP-IB_150305/2022,BA.1.9
Brazil/SP-IB_150341/2022,BA.1.9
Brazil/SP-IB_150418/2022,BA.1.9
Brazil/SP-IB_150344/2022,BA.1.9
Brazil/SP-IB_150410/2022,BA.1.9
Brazil/SP-IB_150340/2022,BA.1.9
Brazil/SP-IB_150334/2022,BA.1.9
Brazil/SP-IB_150368/2022,BA.1.9
Brazil/SP-IB_150439/2022,BA.1.9
Brazil/SP-IB_150394/2022,BA.1.9
Brazil/SP-IB_150455/2022,BA.1.9
Brazil/SP-IB_150370/2022,BA.1.9
Brazil/SP-IB_150366/2022,BA.1.9
Brazil/SP-IB_150432/2022,BA.1.9
Brazil/SP-IB_150450/2022,BA.1.9
Brazil/SP-IB_150443/2022,BA.1.9
Brazil/SP-IB_150354/2022,BA.1.9
Brazil/SP-IB_150355/2022,BA.1.9
Brazil/SP-IB_150434/2022,BA.1.9
Brazil/SP-IB_150351/2022,BA.1.9
Brazil/SP-IB_150353/2022,BA.1.9
Brazil/SP-IB_150490/2022,BA.1.9
Brazil/SP-IB_150476/2022,BA.1.9
Brazil/SP-IB_150480/2022,BA.1.9
Brazil/SP-IB_150475/2022,BA.1.9
Brazil/SP-IB_150227/2022,BA.1.9
Brazil/SP-IB_150517/2022,BA.1.9
Brazil/SP-IB_150505/2022,BA.1.9
Brazil/SP-IB_150500/2022,BA.1.9
Brazil/SP-IB_150501/2022,BA.1.9
Brazil/SP-IB_150493/2022,BA.1.9
Brazil/SP-IB_150245/2022,BA.1.9
Brazil/SP-IB_150397/2022,BA.1.9
Brazil/SP-IB_150481/2022,BA.1.9
Brazil/SP-IB_150462/2022,BA.1.9
Brazil/SP-IB_150265/2022,BA.1.9
Brazil/SP-HIAE-ID1261/2022,BA.1.9
Brazil/PE-FIOCRUZ-IAM6981/2022,BA.1.9
Brazil/AL-FIOCRUZ-IAM7060/2021,BA.1.9
Brazil/AL-FIOCRUZ-IAM7056/2021,BA.1.9
Brazil/AL-FIOCRUZ-IAM7064/2021,BA.1.9
Brazil/AL-FIOCRUZ-IAM7066/2022,BA.1.9
Brazil/AL-FIOCRUZ-IAM7077/2022,BA.1.9
Brazil/AL-FIOCRUZ-IAM7063/2022,BA.1.9
Brazil/PE-FIOCRUZ-IAM7309/2022,BA.1.9
Brazil/SP-IB_147997/2022,BA.1.9
Brazil/SP-IB_148035/2022,BA.1.9
USA/MN-MDH-21738/2022,BA.1.9
Brazil/SP-IB_SEQ25162/2021,BA.1.9
Brazil/SP-IB_SEQ26930/2021,BA.1.9
Brazil/SP-IB_149026/2022,BA.1.9
Brazil/SP-IB_149792/2022,BA.1.9
Brazil/SP-IB_149812/2022,BA.1.9
Brazil/SP-IB_149824/2022,BA.1.9
Brazil/SP-IB_149831/2022,BA.1.9
Brazil/SP-IB_149868/2022,BA.1.9
Brazil/SP-IB_149881/2022,BA.1.9
Brazil/SP-IB_149896/2022,BA.1.9
Brazil/SP-IB_149910/2022,BA.1.9
Brazil/SP-IB_149943/2022,BA.1.9
Brazil/SP-IB_149948/2022,BA.1.9
Brazil/SP-IB_149907/2022,BA.1.9
Brazil/SP-IB_149916/2022,BA.1.9
Brazil/SP-IB_149911/2022,BA.1.9
Brazil/SP-IB_149912/2022,BA.1.9
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Brazil/SP-IB_149890/2022,BA.1.9
Brazil/SP-IB_149903/2022,BA.1.9
Brazil/SP-IB_149895/2022,BA.1.9
Brazil/AM-FIOCRUZ-ILMD2201985/2022,BA.1.9
Scotland/QEUH-306E0CB/2021,BA.1.9
England/PHEC-4X0A8Z92/2022,BA.1.9
England/NORW-3142F15/2022,BA.1.9
Brazil/SP-IB_146099/2021,BA.1.9
Brazil/SP-IB_146079/2021,BA.1.9
Brazil/AM-FIOCRUZ-ILMD2201604/2022,BA.1.9
Brazil/AM-FIOCRUZ-ILMD2201691/2022,BA.1.9
Brazil/AM-FIOCRUZ-ILMD2201555/2022,BA.1.9
England/QEUH-2E5C65A/2021,BA.1.9
Brazil/SP-IB_RP16767/2022,BA.1.9
Brazil/SP-IB_RP13895/2022,BA.1.9
Brazil/SP-IB_RP14379/2022,BA.1.9
Brazil/SP-IB_RP13218/2022,BA.1.9
Brazil/SP-IB_RP14398/2022,BA.1.9
Brazil/SP-IB_RP14365/2022,BA.1.9
Brazil/SP-IB_RP15057/2022,BA.1.9
Brazil/SP-IB_RP13217/2022,BA.1.9
Brazil/AM-FIOCRUZ-ILMD2201167/2022,BA.1.9
Brazil/AM-FIOCRUZ-ILMD2200823/2022,BA.1.9
Brazil/AM-FIOCRUZ-ILMD2200488/2022,BA.1.9
Brazil/AM-FIOCRUZ-ILMD2200569/2022,BA.1.9
Brazil/SP-IB_149834/2022,BA.1.9
Brazil/SP-IB_149833/2022,BA.1.9
Brazil/SP-IB_149813/2022,BA.1.9
Brazil/SP-IB_149819/2022,BA.1.9
Brazil/SP-IB_149820/2022,BA.1.9
Brazil/SP-IB_149864/2022,BA.1.9
Brazil/SP-IB_149794/2022,BA.1.9
Brazil/SP-IB_149803/2022,BA.1.9
Brazil/SP-IB_149863/2022,BA.1.9
Brazil/SP-IB_149859/2022,BA.1.9
Brazil/SP-IB_149244/2022,BA.1.9
Brazil/SP-IB_149935/2022,BA.1.9
Brazil/SP-IB_145967/2021,BA.1.9
Brazil/SP-IB_148029/2022,BA.1.9
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Brazil/SP-IB_148024/2022,BA.1.9
Brazil/SP-IB_148015/2022,BA.1.9
Brazil/SP-IB_148069/2022,BA.1.9
Brazil/SP-IB_148079/2022,BA.1.9
Brazil/SP-IB_148093/2022,BA.1.9
Brazil/SP-IB_148126/2022,BA.1.9
Brazil/SP-IB_148118/2022,BA.1.9
Brazil/SP-IB_148119/2022,BA.1.9
Brazil/SP-IB_148221/2022,BA.1.9
Brazil/SP-IB_148220/2022,BA.1.9
Brazil/SP-IB_148233/2022,BA.1.9
Brazil/SP-IB_148251/2022,BA.1.9
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Brazil/SP-IB_148257/2022,BA.1.9
Brazil/SP-IB_148259/2022,BA.1.9
Brazil/SP-IB_148099/2022,BA.1.9
Brazil/SP-IB_148042/2022,BA.1.9
Brazil/SP-IB_148041/2022,BA.1.9
Brazil/SP-IB_148034/2022,BA.1.9
Brazil/SP-IB_148084/2022,BA.1.9
Brazil/SP-IB_148113/2022,BA.1.9
Brazil/SP-IB_148116/2022,BA.1.9
Brazil/SP-IB_148000/2022,BA.1.9
Brazil/SP-IB_148072/2022,BA.1.9
Brazil/SP-IB_148006/2022,BA.1.9
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Brazil/SP-IB_148022/2022,BA.1.9
Brazil/SP-IB_148016/2022,BA.1.9
Brazil/SP-IB_148073/2022,BA.1.9
Brazil/SP-IB_148065/2022,BA.1.9
Brazil/SP-IB_148062/2022,BA.1.9
Brazil/SP-IB_148205/2022,BA.1.9
Brazil/SP-IB_148812/2022,BA.1.9
Brazil/SP-IB_148218/2022,BA.1.9
Brazil/SP-IB_148217/2022,BA.1.9
Brazil/SP-IB_148350/2022,BA.1.9
Brazil/SP-IB_148881/2022,BA.1.9
Brazil/SP-IB_148206/2022,BA.1.9
Brazil/SP-IB_148224/2022,BA.1.9
Brazil/SP-IB_148237/2022,BA.1.9
Brazil/SP-IB_148297/2022,BA.1.9
Brazil/SP-IB_148295/2022,BA.1.9
Brazil/SP-IB_148287/2022,BA.1.9
Brazil/SP-IB_148182/2022,BA.1.9
Brazil/SP-IB_148183/2022,BA.1.9
Brazil/SP-IB_148184/2022,BA.1.9
Brazil/SP-IB_148277/2022,BA.1.9
Brazil/SP-IB_148260/2022,BA.1.9
Brazil/SP-IB_148364/2022,BA.1.9
Brazil/SP-IB_147989/2022,BA.1.9
Brazil/SP-IB_147985/2022,BA.1.9
Brazil/SP-IB_147995/2022,BA.1.9
Brazil/SP-IB_147978/2022,BA.1.9
Brazil/SP-IB_147974/2022,BA.1.9
Brazil/SP-IB_147984/2022,BA.1.9
Brazil/SP-IB_147967/2022,BA.1.9
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Brazil/SP-IB_148147/2022,BA.1.9
Brazil/SP-IB_148143/2022,BA.1.9
Brazil/SP-IB_148144/2022,BA.1.9
Brazil/SP-IB_147052/2022,BA.1.9
Brazil/SP-IB_147191/2022,BA.1.9
Brazil/SP-IB_147310/2022,BA.1.9
Brazil/SP-IB_147208/2022,BA.1.9
Brazil/SP-IB_147211/2022,BA.1.9
Brazil/SP-IB_147223/2022,BA.1.9
Brazil/SP-IB_147230/2022,BA.1.9
Brazil/SP-IB_147234/2022,BA.1.9
Brazil/SP-IB_147232/2022,BA.1.9
Brazil/SP-IB_147267/2022,BA.1.9
Brazil/SP-IB_147290/2022,BA.1.9
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Brazil/SP-IB_147257/2022,BA.1.9
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Brazil/SP-IB_147225/2022,BA.1.9
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Brazil/SP-IB_147221/2022,BA.1.9
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Brazil/SP-IB_147023/2022,BA.1.9
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Brazil/SP-IB_147103/2022,BA.1.9
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Brazil/SP-IB_147179/2022,BA.1.9
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Brazil/SP-IB_150513/2022,BA.1.9
Brazil/AM-FIOCRUZ-ILMD2200755/2022,BA.1.9
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Brazil/AM-FIOCRUZ-ILMD2200853/2022,BA.1.9
Brazil/AM-FIOCRUZ-ILMD2200992/2022,BA.1.9
Brazil/SP-SEQ25137/2021,BA.1.9
Brazil/SP-IB_150720/2022,BA.1.9
Brazil/AL-FIOCRUZ-IAM7684/2022,BA.1.9
Brazil/AL-FIOCRUZ-IAM7695/2022,BA.1.9
Brazil/AL-FIOCRUZ-IAM7720/2022,BA.1.9
Brazil/AL-FIOCRUZ-IAM7719/2022,BA.1.9
Brazil/PE-FIOCRUZ-IAM7725/2022,BA.1.9
Brazil/AL-FIOCRUZ-IAM7711/2022,BA.1.9
Brazil/AL-FIOCRUZ-IAM7699/2022,BA.1.9
Brazil/AL-FIOCRUZ-IAM7703/2022,BA.1.9
Brazil/AL-FIOCRUZ-IAM7665/2022,BA.1.9
Brazil/AL-FIOCRUZ-IAM7683/2022,BA.1.9
Brazil/AL-FIOCRUZ-IAM7668/2022,BA.1.9
Brazil/AL-FIOCRUZ-IAM7675/2022,BA.1.9
Brazil/AL-FIOCRUZ-IAM7680/2022,BA.1.9
Brazil/AL-FIOCRUZ-IAM7666/2022,BA.1.9
Brazil/SP-IB_145609/2021,BA.1.9
Brazil/SP-IB_145421/2021,BA.1.9
Brazil/SP-IB_145423/2021,BA.1.9
Brazil/SP-IB_145422/2021,BA.1.9
Brazil/SP-IB_145425/2021,BA.1.9
Brazil/SP-IB_145420/2021,BA.1.9
Brazil/SP-IB_145451/2021,BA.1.9
England/MILK-2E96BA0/2021,BA.1.9
Brazil/SP-IB_146017/2021,BA.1.9
Brazil/SP-IB_146174/2021,BA.1.9
Scotland/QEUH-3079C23/2021,BA.1.9
Chile/RM-197339/2021,BA.1.9
USA/NJ-CDC-IBX717189637045/2022,BA.1.9
Scotland/ALDP-3092D03/2021,BA.1.9
Brazil/SP-BT57155/2022,BA.1.9
Brazil/SP-BT57351/2022,BA.1.9
Brazil/SP-BT57357/2022,BA.1.9
Brazil/SP-BT57333/2022,BA.1.9
Brazil/SP-BT57070/2022,BA.1.9
Brazil/SP-BTCov151/2022,BA.1.9
Brazil/SP-BTCov142/2022,BA.1.9
Brazil/SP-BTCov135/2022,BA.1.9
Brazil/SP-BTCov121/2022,BA.1.9
Scotland/QEUH-2E54212/2021,BA.1.9
England/NEWC-3142EFF/2022,BA.1.9
Brazil/SP-IB_145875/2021,BA.1.9
Brazil/SP-IB_145874/2021,BA.1.9
Brazil/AM-FIOCRUZ-ILMD2201995/2022,BA.1.9
Brazil/SP-IB_145105/2021,BA.1.9

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