version 2.1.2

DESCRIPTION

@@ -1,10 +1,10 @@
 Package: IMIFA
 Type: Package
-Date: 2019-12-11
+Date: 2020-03-30
 Title: Infinite Mixtures of Infinite Factor Analysers and Related
         Models
-Version: 2.1.1
-Authors@R: c(person("Keefe", "Murphy", email = "keefe.murphy@ucd.ie", role = c("aut", "cre")),
+Version: 2.1.2
+Authors@R: c(person("Keefe", "Murphy", email = "keefe.murphy@ucd.ie", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-7709-3159")),
              person("Cinzia", "Viroli", email = "cinzia.viroli@unibo.it", role = "ctb"),
              person("Isobel Claire", "Gormley", email = "claire.gormley@ucd.ie", role = "ctb"))
 Description: Provides flexible Bayesian estimation of Infinite Mixtures of Infinite Factor Analysers and related models, for nonparametrically clustering high-dimensional data, introduced by Murphy et al. (2019) <doi:10.1214/19-BA1179>. The IMIFA model conducts Bayesian nonparametric model-based clustering with factor analytic covariance structures without recourse to model selection criteria to choose the number of clusters or cluster-specific latent factors, mostly via efficient Gibbs updates. Model-specific diagnostic tools are also provided, as well as many options for plotting results, conducting posterior inference on parameters of interest, posterior predictive checking, and quantifying uncertainty.
@@ -14,20 +14,20 @@ Encoding: UTF-8
 URL: https://cran.r-project.org/package=IMIFA
 BugReports: https://github.com/Keefe-Murphy/IMIFA
 LazyData: true
-Imports: matrixStats, mclust (>= 5.1), mvnfast, Rfast (>= 1.9.4), slam,
+Imports: matrixStats, mclust (>= 5.1), mvnfast, Rfast (>= 1.9.8), slam,
         viridis
-Suggests: gmp, knitr, mcclust, methods, rmarkdown, Rmpfr
-RoxygenNote: 7.0.2
+Suggests: gmp, knitr, mcclust, rmarkdown, Rmpfr
+RoxygenNote: 7.1.0
 VignetteBuilder: knitr
 Collate: 'MainFunction.R' 'Diagnostics.R' 'FullConditionals.R'
         'Gibbs_FA.R' 'Gibbs_IFA.R' 'Gibbs_IMFA.R' 'Gibbs_IMIFA.R'
         'Gibbs_MFA.R' 'Gibbs_MIFA.R' 'Gibbs_OMFA.R' 'Gibbs_OMIFA.R'
         'IMIFA.R' 'PlottingFunctions.R' 'SimulateData.R' 'data.R'
 NeedsCompilation: no
-Packaged: 2019-12-11 11:20:44 UTC; Keefe
-Author: Keefe Murphy [aut, cre],
+Packaged: 2020-03-30 14:04:22 UTC; Keefe
+Author: Keefe Murphy [aut, cre] (<https://orcid.org/0000-0002-7709-3159>),
   Cinzia Viroli [ctb],
   Isobel Claire Gormley [ctb]
 Maintainer: Keefe Murphy <keefe.murphy@ucd.ie>
 Repository: CRAN
-Date/Publication: 2019-12-11 11:50:02 UTC
+Date/Publication: 2020-03-30 14:40:02 UTC

MD5

@@ -1,64 +1,64 @@
-a0da8429e252bc24eb96486898efe0ab *DESCRIPTION
-16ce5c6413a73473b3e955c71c67afd5 *NAMESPACE
-00c9a505c98bae70c65710e6b0e05eb6 *R/Diagnostics.R
-605ba5b1e5e756757373fcf120e12298 *R/FullConditionals.R
-e3136bb6a1c5fa4f0beb9a48617dbd3a *R/Gibbs_FA.R
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-659a4b9b71365e2116080f169b1af948 *R/PlottingFunctions.R
-ecf7283cda24c18264bcc966e4d61efb *R/SimulateData.R
-8c6de8d5f86d621b7761f03e435a41d4 *R/data.R
+83f645d2482afa97f2fd516c1f64648d *DESCRIPTION
+66621f0dbda0c707ddf208f9c9be4e84 *NAMESPACE
+6f12cc74be8e133a71020f5b0ab7bac3 *R/Diagnostics.R
+f50fad29cec15e90a2db7345f65efaa5 *R/FullConditionals.R
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+ae58c71063c05daee27ca61a3bdfc4f4 *R/SimulateData.R
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 2af7e8e682cf1637f4ab4add57001e92 *README.md
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 d5318c9f6e7f7e0a33fbafb3dfb6dec4 *man/G_priorDensity.Rd
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 d9a31c71eb43a9e5ff02e921e6cfddcb *man/mat2cols.Rd
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-081691d4a077690b8f8045afcd8027b8 *man/mgpControl.Rd
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 64bf47da447df7674040d78b935967cb *man/mixfaControl.Rd
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 ea0b7417c32dcfc9762bdfc3b215e8a7 *man/show_digit.Rd
 5ced7faf37e0a74771bf6e4e9bf5d4ed *man/sim_IMIFA.Rd
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-e92be95a7cdd64aed6fc48f45cdf7fd7 *vignettes/IMIFA.Rmd
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 ac0d7c6341a94c7a26756f2d9aa8dafd *vignettes/res_olive_IMIFA__Edited-Vignette-only-Version.rda

NAMESPACE

@@ -1,4 +1,4 @@
-# Generated by roxygen2: do not edit by hand
+# Generated by roxygen2: do not edit by hand
 
 S3method(get_IMIFA_results,IMIFA)
 S3method(plot,Results_IMIFA)
@@ -41,18 +41,20 @@ export(show_digit)
 export(sim_IMIFA_data)
 export(sim_IMIFA_model)
 export(storeControl)
+importFrom(Rfast,"Median")
 importFrom(Rfast,"Var")
 importFrom(Rfast,"colMaxs")
 importFrom(Rfast,"colMedians")
 importFrom(Rfast,"colTabulate")
+importFrom(Rfast,"colVars")
 importFrom(Rfast,"is.symmetric")
 importFrom(Rfast,"matrnorm")
-importFrom(Rfast,"med")
 importFrom(Rfast,"rowAll")
 importFrom(Rfast,"rowMaxs")
 importFrom(Rfast,"rowOrder")
 importFrom(Rfast,"rowSort")
 importFrom(Rfast,"rowTabulate")
+importFrom(Rfast,"rowVars")
 importFrom(matrixStats,"colMeans2")
 importFrom(matrixStats,"colSums2")
 importFrom(matrixStats,"rowLogSumExps")