version 1.1.5

DESCRIPTION

@@ -1,24 +1,24 @@
 Package: MetaLonDA
 Type: Package
 Title: Metagenomics Longitudinal Differential Abundance Method
-Version: 1.1.0
-Date: 2018-5-23
-Author: Ahmed Metwally, Yang Dai, Patricia Finn, David Perkins
-Maintainer: Ahmed Metwally <ametwa2@uic.edu>
+Version: 1.1.5
+Date: 2019-04-12
+Author: Ahmed A. Metwally, Yang Dai, Patricia W. Finn, David L. Perkins
+Maintainer: Ahmed A. Metwally <ametwall@stanford.edu>
 URL: https://github.com/aametwally/MetaLonDA
 BugReports: https://github.com/aametwally/MetaLonDA/issues
-Description: Identify time intervals of differentially abundant metagenomics features in longitudinal studies.
+Description: Identify time intervals of differentially abundant metagenomic features in longitudinal studies (Metwally AA, et al., Microbiome, 2018 <doi:10.1186/s40168-018-0402-y>).
 License: MIT + file LICENSE
 Depends: R(>= 3.2.0)
-Imports: gss, plyr, caTools, ggplot2, parallel, doParallel,
+Imports: gss, plyr, zoo, pracma, ggplot2, parallel, doParallel,
         metagenomeSeq, DESeq2, edgeR
 Suggests: knitr, rmarkdown
 biocViews:
 Repository: CRAN
 NeedsCompilation: no
 Encoding: UTF-8
 LazyData: true
-RoxygenNote: 6.0.1
+RoxygenNote: 6.1.1
 VignetteBuilder: knitr
-Packaged: 2018-05-26 00:10:06 UTC; ahmedmetwally
-Date/Publication: 2018-05-26 05:07:55 UTC
+Packaged: 2019-04-13 09:02:39 UTC; ahmedmetwally
+Date/Publication: 2019-04-13 22:43:03 UTC

LICENSE

@@ -1,2 +1,2 @@
-YEAR: 2018
+YEAR: 2019
 COPYRIGHT HOLDER: Ahmed Metwally

MD5

@@ -1,30 +1,31 @@
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-b72e0ecbb39b0174cdea295fbca01c1c *LICENSE
-dab7c975a3313e7d7f26a8bd57d8f59b *NAMESPACE
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NAMESPACE

@@ -13,13 +13,15 @@ export(visualizeArea)
 export(visualizeFeature)
 export(visualizeFeatureSpline)
 export(visualizeTimeIntervals)
-import(caTools)
+export(visualizeVolcanoPlot)
 import(doParallel)
 import(ggplot2)
 import(grDevices)
 import(graphics)
 import(gss)
 import(parallel)
 import(plyr)
+import(pracma)
 import(stats)
 import(utils)
+import(zoo)