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Package: R2ucare | ||
Maintainer: Olivier Gimenez <olivier.gimenez@cefe.cnrs.fr> | ||
Authors@R: | ||
c(person(given = "Olivier", | ||
family = "Gimenez", | ||
role = c("aut", "cre"), | ||
email = "olivier.gimenez@cefe.cnrs.fr", | ||
comment = c(ORCID = "0000-0001-7001-5142")), | ||
person(given = "Jean-Dominique", | ||
family = "Lebreton", | ||
role = "ctb"), | ||
person(given = "Remi", | ||
family = "Choquet", | ||
role = "ctb"), | ||
person(given = "Roger", | ||
family = "Pradel", | ||
role = "ctb")) | ||
License: GPL (>= 2) | ||
Title: Goodness-of-Fit Tests for Capture-Recapture Models | ||
Author: Olivier Gimenez, Jean-Dominique Lebreton, Remi Choquet, Roger Pradel | ||
Description: Performs goodness-of-fit tests for capture-recapture models. Also contains several functions to process capture-recapture data. | ||
Version: 1.0.0 | ||
Description: Performs goodness-of-fit tests for capture-recapture models as | ||
described by Gimenez et al. (2018) <doi:10.1111/2041-210X.13014>. | ||
Also contains several functions to process capture-recapture data. | ||
Version: 1.0.2 | ||
URL: https://github.com/oliviergimenez/R2ucare | ||
Depends: R (>= 3.3.0) | ||
Suggests: knitr, rmarkdown | ||
Suggests: knitr, rmarkdown, testthat | ||
Imports: stringr, RMark, stats, utils | ||
Encoding: UTF-8 | ||
LazyData: true | ||
RoxygenNote: 5.0.1.9000 | ||
RoxygenNote: 7.2.0 | ||
VignetteBuilder: knitr | ||
BugReports: https://github.com/oliviergimenez/R2ucare/issues | ||
NeedsCompilation: no | ||
Packaged: 2017-04-12 22:11:13 UTC; gimenez | ||
Packaged: 2022-07-09 01:26:19 UTC; Murray | ||
Author: Olivier Gimenez [aut, cre] (<https://orcid.org/0000-0001-7001-5142>), | ||
Jean-Dominique Lebreton [ctb], | ||
Remi Choquet [ctb], | ||
Roger Pradel [ctb] | ||
Maintainer: Olivier Gimenez <olivier.gimenez@cefe.cnrs.fr> | ||
Repository: CRAN | ||
Date/Publication: 2017-04-13 00:09:48 UTC | ||
Date/Publication: 2022-07-11 08:10:12 UTC |
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1912e19de972a94a861430d3ba525dca *DESCRIPTION | ||
192f4f3d9823fb6ad64e519153e97327 *NAMESPACE | ||
f8ee878709a443f452dffb9a3fc589af *R/coef_mixtures.R | ||
04e6486ca941e1f62267e2fcfcd72bda *R/deviance_mixture.R | ||
f7e171b54caa4a75d7d5eddad6b091b4 *R/expval_table.R | ||
f810359e87340385d184df41c3205557 *R/gof_test.R | ||
1237f704f79986f1fa87417e82dfcaed *R/group_data.R | ||
0a24cccafedc5477e3f9815e0c16fdec *R/group_data_gen.R | ||
6970f02581e68ad51ca0900cf2d8f5e1 *R/ind_test_22.R | ||
ef2e7702d6a23e9f3fffbe773dc1a839 *R/ind_test_rc.R | ||
60444c1ddd358090a0ad22f58ff5ee0f *R/inv_logit_gen.R | ||
899e77558d75327cefea6feddc399fc0 *R/marray.R | ||
58f3d319b2039d3aecb6c0e62d2adf4f *R/multimarray.R | ||
85dafefe31f82ae5840870dd210403fd *R/overall_CJS.R | ||
7d7273cfb5a52e024363bb789ee6d12b *R/overall_JMV.R | ||
eba583310f90b7a037461f4dc9bd7972 *R/pool2K.R | ||
9e7c4065c5ac1aea47dda2ec619ae75f *R/pooling_ct.R | ||
18c9e12778d48189fc0e7800ef019d98 *R/pooling_mixtures.R | ||
48199105bda20edebd5b80c29e3c3c2b *R/read_headed.R | ||
08e8b7d699ac4fdd22d0403132c24a8b *R/read_inp.R | ||
5e503aa4e8c9b0d4daa2d069569ee056 *R/reconstitution.R | ||
2ec533adbf40a5543406b4cd93ff861d *R/repmat.R | ||
a4bb09a841372946c7f5609ead670f80 *R/test2cl.R | ||
5992c477b2548099ed31f0b837dcf5f4 *R/test2ct.R | ||
65f5cbceb085b73d39d91f51a2517ff6 *R/test3Gsm.R | ||
10fddf4396941574d254e9517b3b7470 *R/test3Gsr.R | ||
33264abed3cb6a1e0f34ca8a1c2ba0b7 *R/test3Gwbwa.R | ||
0db6e8f86d470684c855ab0fbc7e4eec *R/test3sm.R | ||
94308d0d143a2c07b171002f303b1cdf *R/test3sr.R | ||
3d75ea1b8e7af39a0c68c6638963c513 *R/testMitec.R | ||
29234892315bcffdb931267ee10b91c2 *R/testMltec.R | ||
94a3ed3e0dac9b76dfac4d8cffa1696f *R/ungroup_data.R | ||
e1a82f6a11ea7b8f6c14a791f9d8561f *README.md | ||
aaab01fa66ee0de98a4a66d64cf5e0c7 *build/vignette.rds | ||
fc665d7cf38dcf25d5f3a3b3a4849d60 *inst/doc/vignette_R2ucare.R | ||
b13c92476834f41c691a74e4abdddd9a *inst/doc/vignette_R2ucare.Rmd | ||
8b1780006f48c15bcd43d59a62196829 *inst/doc/vignette_R2ucare.html | ||
3d68e0d8997d873844dbfbb1469d4b2f *DESCRIPTION | ||
b31b74a76917873cd17155aef4377cd0 *NAMESPACE | ||
a882e3e830851d2b84f0bf1afc85220c *NEWS.md | ||
593641ef19adf11adb0651d0980a7f68 *R/coef_mixtures.R | ||
54f4ebaf60de1e7708726d0d54a6632d *R/deviance_mixture.R | ||
af487fa901be8fe21ef279a1addfc08f *R/expval_table.R | ||
53325ffa81189a8637ae5cad6acd72de *R/gof_test.R | ||
474af2de539b65927c8b60a339590dee *R/group_data.R | ||
0578e7ddf64e183dfec455ce80672e82 *R/group_data_gen.R | ||
ba5c0bdd23c4329c3871df6f99e0966f *R/ind_test_22.R | ||
4cd0396f70aa991c2921b53af1820970 *R/ind_test_rc.R | ||
94f004b465a4d13c64f65ce5262fd2ba *R/inv_logit_gen.R | ||
6614f9776eb761738ee59b26abdb70aa *R/marray.R | ||
f37f9d7eb7e41c7c257c3109dcf70ee1 *R/multimarray.R | ||
cf759764b835f5b4255468702c9e17f1 *R/overall_CJS.R | ||
cf8c2035edbeaa65c43d4cba77ce9946 *R/overall_JMV.R | ||
b3ed2e181a5c80f87c7050afc3cccaea *R/pool2K.R | ||
224075d9396a1c18d29c81d9ab056db8 *R/pooling_ct.R | ||
f83793d588ff3d854001a1b953ac69c2 *R/pooling_mixtures.R | ||
0d38b880d1e22fac62deb807fa73f93d *R/read_headed.R | ||
8c9bfac15c71368a47adea5d074eab4a *R/read_inp.R | ||
124ac993b3adccfbef3561358bc465df *R/reconstitution.R | ||
8b935c38a74806a2d58e944b619a6a63 *R/repmat.R | ||
7ca9def298d69ae0f8f7e5a39aa9438e *R/test2cl.R | ||
ac446d6375cbb223d7275303f745311d *R/test2ct.R | ||
7e1df819c2afa919d127a1e445478948 *R/test3Gsm.R | ||
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8756bea1833b1b82c778934a40299c42 *R/test3Gwbwa.R | ||
293ddbeb8d751966ea0dd75f926ac513 *R/test3sm.R | ||
aa8d9f42f63afaeabc72aaf0d219d752 *R/test3sr.R | ||
3aebd51fe0de704ebeb7ed3f8d219552 *R/testMitec.R | ||
14b862d1b7717899795f9d63f39ed3db *R/testMltec.R | ||
8e891ab6152f2bbdbe2e092a3361a839 *R/ungroup_data.R | ||
3744fd77f2f35b5a3f192e7e6b2c60e2 *R/zzz.R | ||
a4bee1bd7c18e9e804e8324dec7488a9 *build/vignette.rds | ||
6825a1a6ed00aebf19c4a6bf84e864fd *inst/CITATION | ||
c267e25204e16bbb14c36280a230b5af *inst/doc/vignette_R2ucare.R | ||
61ddc6d5c173e508bc644b8bac206b44 *inst/doc/vignette_R2ucare.Rmd | ||
30fb5c5933b4afcfd95b611848807e35 *inst/doc/vignette_R2ucare.html | ||
128e570be606ec5484643f1b308e52cb *inst/extdata/ed.inp | ||
55e94a889fd39d45eb65b43835dff8ba *inst/extdata/ed.txt | ||
4642ff4598f4fbebd773e34629cc12f4 *inst/extdata/geese.inp | ||
d2cb67e3a569aa9119e34eb4badb0ea7 *inst/extdata/geese.txt | ||
5386626b193d18bceace8d7b740482ff *inst/extdata/geese.txt | ||
c40429139d3cab797a443432fac796e4 *inst/extdata/sooty.inp | ||
b847e02cac5da0eef72917c59d8c52dd *inst/extdata/swift.inp | ||
7d8c20d6e8d43fbc3ccb222d608f4ae5 *inst/extdata/wolf.inp | ||
fc59a94313952c8dbe33c9f9042985f7 *man/coef_mixtures.Rd | ||
01368126a55b51cf0b5d8e109075ed77 *man/deviance_mixture.Rd | ||
5e3b3c0db4fe12f316cc9004f0e903d9 *man/expval_table.Rd | ||
eb829b9f5c58690fbbc8a0b774dcd2ba *man/gof_test.Rd | ||
a3469a4582a585a5cbb745e66b3ef8bf *man/group_data.Rd | ||
61f03f8dc6a36d1715d40177c7965396 *man/group_data_gen.Rd | ||
b7147852b628d11e6ded8c8f4a60d3bc *man/ind_test_22.Rd | ||
ea9248cb3d53c3356daf527ba1005d91 *man/ind_test_rc.Rd | ||
25e62e5200a319d928860927d704be67 *man/inv_logit_gen.Rd | ||
b72b71e8f0e4aeaca9f88a2a3ac22861 *man/marray.Rd | ||
874be1240fd1c1baa5a46f24dcd09365 *man/multimarray.Rd | ||
a5f837864b18d5df2cbfa2b5ae0e45a6 *man/overall_CJS.Rd | ||
dce1b4443d7e286f288d0e5e35ca5e76 *man/overall_JMV.Rd | ||
a0a6f5d4c1d243433a33dae668129cf9 *man/pool2K.Rd | ||
42e8c3380a5d0c2ad055510801b5fd4f *man/pooling_ct.Rd | ||
43da182cc0e0185438049e5eb77b6eeb *man/pooling_mixtures.Rd | ||
afede12e76c81d571ae4219e586b2dc2 *man/read_headed.Rd | ||
8bad3c711ea67369ce2429579217f3ea *man/read_inp.Rd | ||
2317d39175b3aec93192fcfd3f15f35c *man/reconstitution.Rd | ||
aa01983e9d3a6df7080a1fed05fc4db0 *man/repmat.Rd | ||
59eb722354d8e20ff4cee37994fbaba4 *man/test2cl.Rd | ||
a592d39e2d290b4f7d2706c81fe07c36 *man/test2ct.Rd | ||
ff78260912685a2efb0a5eb2b06bab91 *man/test3Gsm.Rd | ||
a1c2a3e7eafed1b8029f3547660c443f *man/test3Gsr.Rd | ||
766d558679408da58a0975518cc3392d *man/test3Gwbwa.Rd | ||
e8c7a2ab077df402c9d6904e3ebecbbe *man/test3sm.Rd | ||
d8d7c8138dc0b8667e8ff431a42b362d *man/test3sr.Rd | ||
fae0d6993a6808f0f3dff2eee6583766 *man/testMitec.Rd | ||
21ce89d6eafaf4328515ffe486e7659b *man/testMltec.Rd | ||
fbdef03f42dbe3b059ab306b355d54dd *man/ungroup_data.Rd | ||
b13c92476834f41c691a74e4abdddd9a *vignettes/vignette_R2ucare.Rmd | ||
3a799cfc3d02af3395aa8539246f10e2 *man/coef_mixtures.Rd | ||
e45c07acc7001c2fd0e9d042ea272f6e *man/deviance_mixture.Rd | ||
2fb5a929d246ac5fa7e4287e6ed2db0a *man/expval_table.Rd | ||
ce6985e38ef7a24ee2c824aed02fa5a8 *man/figures/logo.png | ||
2b1717bd73f11ee28db16701b0f7acef *man/gof_test.Rd | ||
b2e19cc4cf9d40f28fd66ad40edcf26b *man/group_data.Rd | ||
9d788321969f8f43777d5927e3ae0fe0 *man/group_data_gen.Rd | ||
85cbc62c6290f3d04d5fd54256d629ee *man/ind_test_22.Rd | ||
e52282407af305d1edd7413280e97645 *man/ind_test_rc.Rd | ||
21eb04dcdcb08eb4c33f9c4f2e634f65 *man/inv_logit_gen.Rd | ||
de59595e106d9839770e8b31a0583531 *man/marray.Rd | ||
c4359719ff7550200ee921283e6cfcfa *man/multimarray.Rd | ||
fdaf6865c530a2e0560d64208c886467 *man/overall_CJS.Rd | ||
ff78ef702e5b7949efa0c48e685c42e4 *man/overall_JMV.Rd | ||
a3d1b24dd48ea9048f03864c9565bd13 *man/pool2K.Rd | ||
8b915413efd38f97f2a4f7d88e532e2b *man/pooling_ct.Rd | ||
505fc39d64a3a39c82ce0443bee8ba11 *man/pooling_mixtures.Rd | ||
7372dc985fd7fa81e7ae101ab80f4178 *man/read_headed.Rd | ||
e1d4281355720373237250c13b60569a *man/read_inp.Rd | ||
d893e503154f05310124774511e00a6b *man/reconstitution.Rd | ||
092d0856bb563ec1bf37c0f581ac5507 *man/repmat.Rd | ||
4c9198909f1569e9e63c106b7eded68a *man/test2cl.Rd | ||
6fd0e74ddc7092f6a7e415f493b1907a *man/test2ct.Rd | ||
6f755e7704964806c67af5109a9c2909 *man/test3Gsm.Rd | ||
de710a50f08f4c9c2abad7c22bcb9e2c *man/test3Gsr.Rd | ||
0420fc4f26148459e5e6355e952f4ea4 *man/test3Gwbwa.Rd | ||
7bc3625178f8b534368e1818cc1ae6d5 *man/test3sm.Rd | ||
806ba5fd9c383cca326480480fe19c85 *man/test3sr.Rd | ||
4d2dca5d025e9802f5419bc3087cde1c *man/testMitec.Rd | ||
15e94de2f4439c6bbd33d1c0fd286426 *man/testMltec.Rd | ||
d7be2df15ccaddb387eca3320b69f6e3 *man/ungroup_data.Rd | ||
c1a9db2341b974025ed204b511a03b40 *tests/testthat.R | ||
e181557ffce2dc04f005112da728eaf2 *tests/testthat/test-test2cl.R | ||
619c93e48feb1035034c17d3bd993d8f *tests/testthat/test-test2ct.R | ||
6abf71b03f6214b922ce5993d095fff9 *tests/testthat/test-test3Gsm.R | ||
65d46ccd256d37ad59f25f22152cae8c *tests/testthat/test-test3Gsr.R | ||
c7ee369abbae9919ed0264807f1d8a2c *tests/testthat/test-test3Gwbwa.R | ||
371a599edaea763d1cf839c1649aae8b *tests/testthat/test-test3sm.R | ||
b1a8411b30c40fb8ae8d629a4491fd38 *tests/testthat/test-test3sr.R | ||
f2130c121ba8ada6e94e7f9aee5d6b9f *tests/testthat/test-testMitec.R | ||
dc9004a28d2ae217c39d0146d6a24141 *tests/testthat/test-testMltec.R | ||
61ddc6d5c173e508bc644b8bac206b44 *vignettes/vignette_R2ucare.Rmd |
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# Generated by roxygen2: do not edit by hand | ||
|
||
export(coef_mixtures) | ||
export(deviance_mixture) | ||
export(expval_table) | ||
export(gof_test) | ||
export(group_data) | ||
export(group_data_gen) | ||
export(ind_test_22) | ||
export(ind_test_rc) | ||
export(inv_logit_gen) | ||
export(marray) | ||
export(multimarray) | ||
export(overall_CJS) | ||
export(overall_JMV) | ||
export(pool2K) | ||
export(pooling_ct) | ||
export(pooling_mixtures) | ||
export(read_headed) | ||
export(read_inp) | ||
export(reconstitution) | ||
export(repmat) | ||
export(test2cl) | ||
export(test2ct) | ||
export(test3Gsm) | ||
export(test3Gsr) | ||
export(test3Gwbwa) | ||
export(test3sm) | ||
export(test3sr) | ||
export(testMitec) | ||
export(testMltec) | ||
export(ungroup_data) | ||
# Generated by roxygen2: do not edit by hand | ||
export(coef_mixtures) | ||
export(deviance_mixture) | ||
export(expval_table) | ||
export(gof_test) | ||
export(group_data) | ||
export(group_data_gen) | ||
export(ind_test_22) | ||
export(ind_test_rc) | ||
export(inv_logit_gen) | ||
export(marray) | ||
export(multimarray) | ||
export(overall_CJS) | ||
export(overall_JMV) | ||
export(pool2K) | ||
export(pooling_ct) | ||
export(pooling_mixtures) | ||
export(read_headed) | ||
export(read_inp) | ||
export(reconstitution) | ||
export(repmat) | ||
export(test2cl) | ||
export(test2ct) | ||
export(test3Gsm) | ||
export(test3Gsr) | ||
export(test3Gwbwa) | ||
export(test3sm) | ||
export(test3sr) | ||
export(testMitec) | ||
export(testMltec) | ||
export(ungroup_data) |
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# R2ucare 1.0.2 | ||
|
||
## Bug Fixes | ||
|
||
* none | ||
|
||
## Other changes | ||
|
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* reference with DOI in DESCRIPTION | ||
* suppressWarnings in calls to chisq.test() | ||
* \donttest replaces \dontrun in overall_JMV.Rd, testMitec.Rd and testMltec.Rd | ||
|
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# R2ucare 1.0.1 | ||
|
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## Bug Fixes | ||
|
||
* group_data_gen() failed in R 4.2 because of comparison between length 1 | ||
and length 4 vectors | ||
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* invalid filename for RMark dipper data in vignette | ||
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## Other changes | ||
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* cleaned DESCRIPTION and excluded unnecessary files from source build | ||
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# R2ucare 1.0.0 | ||
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* This is the first release of R2ucare. |
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