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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,89 @@ | ||
| #' Expand metapackages | ||
| #' | ||
| #' @param string_og text string (script) with package load calls | ||
| #' | ||
| #' @return Text string with metapackage load calls replaced by multiple separate | ||
| #' calls to the core packages that make up the metapackage. Core packages will | ||
| #' be fenced in four commenting symbols and the order follows the attachment | ||
| #' order from each metapackage. Will make note of metapackages not currently | ||
| #' installed. | ||
| #' | ||
| #' @examples | ||
| #' test_string <- c("library()\nlibrary(tidyverse)") | ||
| #' | ||
| #' @importFrom stringr str_detect | ||
| #' @importFrom rlang .data | ||
| #' | ||
| #' @export | ||
| #' | ||
| expand_metapackages <- function(string_og){ | ||
| supported_metapackages <- c("tidyverse","tidymodels","easystats") | ||
| # metapackage components as of October 6 2022 | ||
|
|
||
| # tidyverse v1.3.2 | ||
| tidyverse_core <- c( | ||
| "ggplot2", "tibble", "tidyr", | ||
| "readr", "purrr", "dplyr", | ||
| "stringr", "forcats","lubridate" | ||
| ) | ||
|
|
||
| # tidymodels v1.0.0 | ||
| tidymodels_core <- c( | ||
| "broom", "dials", "dplyr", "ggplot2", "infer", | ||
| "modeldata", "parsnip", "purrr", "recipes", "rsample", "tibble", | ||
| "tidyr", "tune", "workflows", "workflowsets", "yardstick" | ||
| ) | ||
|
|
||
| # easystats 0.5.2 | ||
| easystats_core <- c( | ||
| "insight", "datawizard", "bayestestR", "performance", "parameters", "effectsize", | ||
| "modelbased", "correlation", "see", "report" | ||
| ) | ||
| out_tb <- match_pkg_names(string_og) # list, ordered, packages loading | ||
| if (nrow(out_tb) == 0) { | ||
| # if no library or require calls, then return same string. | ||
| cat("no matching library load calls") | ||
| return(string_og) | ||
| } | ||
|
|
||
| metapkgIndices <- apply(outer(out_tb$pkgname_clean,supported_metapackages, stringr::str_detect), 1, any) | ||
| meta_out_tb <- out_tb[metapkgIndices,] | ||
|
|
||
| if (nrow(meta_out_tb) == 0) { | ||
| # if no metapackages detected, then return same string. | ||
| cat("no metapackages") | ||
| return(string_og) | ||
| } | ||
|
|
||
| # check if installed | ||
| meta_out_tb$installed <- purrr::map_lgl(meta_out_tb$pkgname_clean, | ||
| function(x) {suppressWarnings(nzchar(system.file(package = paste(x))))}) | ||
|
|
||
| meta_out_tb$load_call <- stringr::str_extract(meta_out_tb$call,"^[ \t]*.+(?=\\()") | ||
|
|
||
| meta_out_tb$expand_list <- | ||
| ifelse(meta_out_tb$pkgname_clean=="tidymodels"&meta_out_tb$installed==TRUE, | ||
| paste(tidymodels_core,collapse = ","),NA) | ||
| meta_out_tb$expand_list <- | ||
| ifelse(meta_out_tb$pkgname_clean=="tidyverse"&meta_out_tb$installed==TRUE, | ||
| paste(tidyverse_core,collapse = ","),meta_out_tb$expand_list) | ||
| meta_out_tb$expand_list <- | ||
| ifelse(meta_out_tb$pkgname_clean=="easystats"&meta_out_tb$installed==TRUE, | ||
| paste(easystats_core,collapse = ","),meta_out_tb$expand_list) | ||
| meta_out_tb$expand_list <- | ||
| ifelse(is.na(meta_out_tb$expand_list)&meta_out_tb$installed==FALSE, | ||
| meta_out_tb$pkgname_clean,meta_out_tb$expand_list) | ||
|
|
||
| # build replacement load calls | ||
| meta_out_tb <- tidyr::separate_rows(meta_out_tb,.data$expand_list) | ||
| meta_out_tb$replacement_call <- paste0(meta_out_tb$load_call,"(",meta_out_tb$expand_list,")") | ||
| meta_out_tb$replacement_call <- ifelse(meta_out_tb$installed==FALSE,paste(meta_out_tb$replacement_call,"# not installed"),meta_out_tb$replacement_call) | ||
| meta_out_tb <- dplyr::summarize(dplyr::group_by(meta_out_tb,call),replacement_call=paste0(.data$replacement_call,collapse = "\n")) | ||
| meta_out_tb$replacement_call <- ifelse(stringr::str_detect(meta_out_tb$replacement_call,"not installed"), | ||
| meta_out_tb$replacement_call,paste0("####\n",meta_out_tb$replacement_call,"\n####")) | ||
|
|
||
| stringi::stri_replace_all_fixed( | ||
| str = string_og, pattern = meta_out_tb$call, | ||
| replacement = meta_out_tb$replacement_call, vectorize_all = FALSE) | ||
| } | ||
|
|
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,23 @@ | ||
| #' Expand metapackages in Active File | ||
| #' | ||
| #' Replaces metapackage load calls in the active .R file with multiple separate | ||
| #' calls to its core packages. | ||
| #' | ||
| #' @return No return value, wraps [expand_metapackages()] for access via Addin | ||
| #' | ||
| #' @export | ||
| expand_metapackages_active_file <- function() { | ||
| context <- rstudioapi::getActiveDocumentContext() | ||
| if (context[1]$id == "#console") { | ||
| stop("Focus (blinking cursor) is not on an open R file") | ||
| } | ||
| contents_parsed <- paste0(context$contents, sep = "\n", collapse = "") | ||
| out <- annotater::expand_metapackages(contents_parsed) | ||
| outlines <- stringi::stri_split_lines1(out) | ||
|
|
||
| rstudioapi::modifyRange( | ||
| c(1, 1, length(context$contents) + 1, 1), | ||
| paste0(append(outlines, ""), collapse = "\n"), | ||
| id = context$id | ||
| ) | ||
| } |
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