version 0.1-4

ChangeLog

@@ -201,7 +201,7 @@ processing col and pch arguments
 * georob.S3methods.R (add1.georob, drop1.georob, step.georob): changes in functions for reducing memory demand
 
 
-2014-04-23  Andreas Papritz  <papritz@env.ethz.ch>
+2014-05-08  Andreas Papritz  <papritz@env.ethz.ch>
 
 * variogram.R (plot.georob,lines.georob): changes for plotting covariances and correlations
 
@@ -215,4 +215,23 @@ processing col and pch arguments
 * variogram.R (fit.variogram.model): changes for version 3 of RandomFields
 
 
+2014-05-15  Andreas Papritz  <papritz@env.ethz.ch>
+
+* georob.exported.functions.R (georob) changes for selecting intitial.param and initial.method
+
+
+2014-05-28  Andreas Papritz  <papritz@env.ethz.ch>
+
+* georob.cv.R (georob.cv) catching error when all variogram parameters are fixed
+* georob.exported.functions.R (georob, param.bounds, param.names) minor changes in arguments
+* georob.predict.R (predict.georob) further changes for version 3 of RandomFields
+* georob.private.functions.R (georob.fit) change in check for initial variogram parameter values
+* variogram.R (fit.variogram.model) minor changes in arguments
+
+
+2014-06-02  Andreas Papritz  <papritz@env.ethz.ch>
+
+* georob.exported.functions.R (georob) partial matching of names of variogram parameters
+* georob.exported.functions.R (georob.control) new default value for argument irwls.reltol
+
 

DESCRIPTION

@@ -1,8 +1,8 @@
 Package: georob
 Type: Package
 Title: Robust Geostatistical Analysis of Spatial Data
-Version: 0.1-3
-Date: 2014-05-15
+Version: 0.1-4
+Date: 2014-06-02
 Authors@R: c(
   person( "Andreas", "Papritz", role = c( "cre", "aut" ), 
           email =  "andreas.papritz@env.ethz.ch" ),
@@ -18,10 +18,10 @@ Description: The georob package provides functions for fitting linear models
          cross-validation and for unbiased back-transformation of kriging 
          predictions of log-transformed data.
 License: GPL (>= 2)
-Packaged: 2014-05-15 16:14:47 UTC; papritz
+Packaged: 2014-06-02 14:19:54 UTC; papritz
 Author: Andreas Papritz [cre, aut],
   Cornelia Schwierz [ctb]
 Maintainer: Andreas Papritz <andreas.papritz@env.ethz.ch>
 NeedsCompilation: no
 Repository: CRAN
-Date/Publication: 2014-05-15 18:27:25
+Date/Publication: 2014-06-02 17:25:30

MD5

@@ -1,30 +1,30 @@
-60a75c5fc661d22bcabde6f460d3614e *ChangeLog
-a13f977a933a8e70a5cec0de710e8a4a *DESCRIPTION
+8bb937b921891361008847c603bd6f04 *ChangeLog
+f82cb76272a53aa8b7d784be0f58dd8b *DESCRIPTION
 a1ad734aaae6f7f8c2edec0590bb29f6 *NAMESPACE
-81bd0d77d2ea01aae6836b8da10796ad *NEWS
+3ad956fc91ce51ed8b3c60b6408858f1 *NEWS
 a4b8f9a82635509f338031bb123c91f4 *R/georob.S3methods.R
-bfdca841d6452712b1aa62bdd7baf837 *R/georob.cv.R
-86bf65a87e34aee6d407e9a80ce0abfe *R/georob.exported.functions.R
+c8576ee583e07e390a711cf0964676b4 *R/georob.cv.R
+197dea444856c0f022aa98a0da46dec5 *R/georob.exported.functions.R
 2de0430016d74d0f5cd9e05d930ac524 *R/georob.lgnpp.R
-f2fcc47e192cbfd14109189a8d4dde6a *R/georob.predict.R
-5fe572e71ce2125e7073f2454a045896 *R/georob.private.functions.R
-2f9924f55bc976c137646db3e10eb7ec *R/variogram.R
+204844d0150f47b6feeafb08d34f9fee *R/georob.predict.R
+84a4bb9ed2b64bdd44bcfdeaa507d893 *R/georob.private.functions.R
+6c9553776c891267bbeafdbbc81b8d28 *R/variogram.R
 37024b25066668e93df4dcbd5e12e036 *demo/00Index
-92abfbadc878aeeeaefa8721f341fe8c *demo/georob_example.R
-20c51be7464bc83ffcdf2bc55971a0ad *man/S3methods.georob.Rd
-88c3f25bd944066ba6bc8acc62f83a23 *man/compress.Rd
+9f74673bd454340178492625f89bed6e *demo/georob_example.R
+59fcec3fd19424081d5204822faac195 *man/S3methods.georob.Rd
+4fa389c6e452874af4e79bb102647688 *man/compress.Rd
 c317de9d9b66e9222c125e5ae382425a *man/cv.Rd
-e2e2b0f6907928407faa9053b2807994 *man/cv.georob.Rd
-fd01fe0d0471f44f72b7c5e2b4bcca8f *man/fit.variogram.model.Rd
-78cebc67e559d028def9c5192c1c5345 *man/georob-package.Rd
-a282f23381614449713ac0c908d220f9 *man/georob.Rd
-e32902267e89de9b372d802f3b97b313 *man/georob.control.Rd
-9c8b10c8bd9cb2a487be6b02221d2e93 *man/georobModelBuilding.Rd
-46899f02770c1ac72dc5be5690a49e77 *man/georobObject.Rd
+9816b6cd43211c16b0c8effbf07b792f *man/cv.georob.Rd
+45d3ac0416dc4005c809b6ab21c54ce8 *man/fit.variogram.model.Rd
+000fe78a681ea027884e590b20fdcbc4 *man/georob-package.Rd
+fdd4c590b982207c113d0113ce31861a *man/georob.Rd
+33052a50532b3550256be8e258e91692 *man/georob.control.Rd
+066cb454b8f97447d3e7fd4034c3ce4d *man/georobModelBuilding.Rd
+601d2749c85c13072a19b6829faccedb *man/georobObject.Rd
 e58b6961c809a73e58a3d18f6abcb4b2 *man/internal.functions.Rd
-4fdd261e5af0eaaf76de74d20511eb7f *man/lgnpp.Rd
-4d05a621402f5eb0c441a2dcf9483190 *man/param.names.Rd
-2250db60cba1864d6b543473f63b7f8a *man/plot.georob.Rd
-225ae731fb08421a6ac3081ce6a5a02f *man/predict.georob.Rd
+96bf7c713b6c57170c097e37b55cfdbc *man/lgnpp.Rd
+7e4a6d89f3cc2bd87ffa7f75a142fc20 *man/param.names.Rd
+d72f1d59e607adffde5547f294e68b50 *man/plot.georob.Rd
+cf5ee5eb9f7981579c4bfd5183ffab76 *man/predict.georob.Rd
 7742eda8db94dd094e2a1fce6406a342 *man/sample.variogram.Rd
-68a14642d34ae88c608a400dd0dc65cf *man/validate.predictions.Rd
+fe907d44b7e8b79785294d4fe3cfe6e2 *man/validate.predictions.Rd

NEWS

@@ -1,4 +1,5 @@
 2012-12-14  georob Version 0.1-0 released!
 2013-09-06  georob Version 0.1-1 released to CRAN
 2014-05-15  georob Version 0.1-3 released to CRAN
+2014-06-02  georob Version 0.1-4 released to CRAN
 

R/georob.cv.R

@@ -62,7 +62,8 @@ cv.georob <-
   ## 2013-07-05 AP return "variogram.model" as part of fit componnent
   ## 2014-02-21 AP catching problem when factor are very unbalanced
   ## 2014-05-15 AP changes for version 3 of RandomFields
-
+  ## 2014-05-28 AP catching error when all variogram parameters are fixed
+
   ## auxiliary function that fits the model and computes the predictions of
   ## a cross-validation set
 
@@ -164,6 +165,18 @@ cv.georob <-
     ## end cv function
   }
 
+  ## check consistency of arguments
+
+  if( !any( c( fit.param, fit.aniso ) ) && re.estimate ){
+    re.estimate <- FALSE
+    cat(
+      "re.estimate set equal to FALSE because all variogram parameters are fixed\n\n"    
+    )
+    warnings(
+      "re.estimate set equal to FALSE because all variogram parameters are fixed"    
+    )
+  }
+
   mfl.action <- match.arg( mfl.action )
 
   ## update terms of object is formula is provided