version 0.2.8

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: manynet
 Title: Many Ways to Make, Manipulate, and Map Myriad Networks
-Version: 0.2.3
-Date: 2023-09-17
+Version: 0.2.8
+Date: 2023-11-02
 Description: A set of tools for making, manipulating, and mapping many different types of networks.
    All functions operate with matrices, edge lists, and 'igraph', 'network', and 'tidygraph' objects,
    and on one-mode, two-mode (bipartite), and sometimes three-mode networks.
@@ -19,8 +19,8 @@ RoxygenNote: 7.2.3
 Imports: dplyr (>= 1.1.0), ggplot2, ggraph, igraph (>= 1.5.0.1),
         network, tidygraph
 Suggests: gganimate, methods, readxl, roxygen2, RSiena, testthat, xml2,
-        patchwork, knitr, rmarkdown, learnr, grDevices, BiocManager,
-        minMSE
+        patchwork, rmarkdown, learnr, grDevices, BiocManager, minMSE,
+        graphlayouts, ggforce, multiplex, concaveman, migraph, knitr
 Enhances: Rgraphviz
 Authors@R: 
     c(person(given = "James",
@@ -34,10 +34,10 @@ Authors@R:
              comment = c("IHEID", ORCID = "0000-0003-3420-6085"))
     )
 NeedsCompilation: no
-Packaged: 2023-09-17 13:57:21 UTC; hollway
+Packaged: 2023-11-02 08:49:47 UTC; hollway
 Author: James Hollway [cre, aut, ctb] (IHEID,
     <https://orcid.org/0000-0002-8361-9647>),
   Henrique Sposito [ctb] (IHEID, <https://orcid.org/0000-0003-3420-6085>)
 Maintainer: James Hollway <james.hollway@graduateinstitute.ch>
 Repository: CRAN
-Date/Publication: 2023-09-17 17:10:02 UTC
+Date/Publication: 2023-11-02 10:10:08 UTC

MD5

@@ -1,89 +1,100 @@
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+8a806c803cd7e177a22f162f94918164 *DESCRIPTION
 361d71c6379f4ddf09ca9c8540b8fea1 *LICENSE
-3ab8ea40ca6fbb3728177c8ca0f1255c *NAMESPACE
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 1467c5cf3b719c40514260257c027b5b *man/tidy.Rd
-862b995f8ce91e77fb4695e38f1c1762 *man/transform.Rd
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+4d5b8f29e189b206d95e3448a8158fd5 *man/tutorials.Rd
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@@ -106,7 +117,7 @@ b644d01d099d612cc806972a4ad28c84 *tests/testthat/test-manip_miss.R
 d7a9db995bdb8e37043eec3b2614d23b *tests/testthat/test-manip_reformat.R
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 47b2d9d25c1b81d27a4439995ac5f7c6 *tests/testthat/test-manip_transform.R
-323d7aae6d20f03784af0c4da77b19ea *tests/testthat/test-map_autographr.R
+11134ac6e6d21ecfbe25bcba9ef4f128 *tests/testthat/test-map_autographr.R
 d699c2b2e6326cd476b4f1539b22b53a *tests/testthat/test-map_is.R
 805f7fd21fcb36696bce345246b6c741 *tests/testthat/test-print_class.R
 04d5192ce082546e899ea7bb5250e7e4 *tests/testthat/test_plots.R

NAMESPACE

@@ -153,6 +153,8 @@ S3method(to_matching,igraph)
 S3method(to_matching,matrix)
 S3method(to_matching,network)
 S3method(to_matching,tbl_graph)
+S3method(to_mentoring,igraph)
+S3method(to_mentoring,tbl_graph)
 S3method(to_mode1,data.frame)
 S3method(to_mode1,igraph)
 S3method(to_mode1,matrix)
@@ -272,6 +274,7 @@ export(create_ring)
 export(create_star)
 export(create_tree)
 export(delete_nodes)
+export(extract_tute)
 export(filter_ties)
 export(from_egos)
 export(from_slices)
@@ -286,6 +289,7 @@ export(ggplot)
 export(ggsave)
 export(ggtitle)
 export(guides)
+export(iheid_palette)
 export(is.igraph)
 export(is.network)
 export(is.tbl_graph)
@@ -315,7 +319,10 @@ export(layout_tbl_graph_alluvial)
 export(layout_tbl_graph_concentric)
 export(layout_tbl_graph_hierarchy)
 export(layout_tbl_graph_ladder)
+export(layout_tbl_graph_multilevel)
+export(layout_tbl_graph_quad)
 export(layout_tbl_graph_railway)
+export(layout_tbl_graph_triad)
 export(mutate)
 export(mutate_ties)
 export(na_to_mean)
@@ -336,6 +343,16 @@ export(read_pajek)
 export(read_ucinet)
 export(rename)
 export(rename_ties)
+export(run_tute)
+export(scale_color_centres)
+export(scale_color_iheid)
+export(scale_color_sdgs)
+export(scale_colour_centres)
+export(scale_colour_iheid)
+export(scale_colour_sdgs)
+export(scale_fill_centres)
+export(scale_fill_iheid)
+export(scale_fill_sdgs)
 export(select_ties)
 export(summarise_ties)
 export(theme_iheid)
@@ -349,8 +366,10 @@ export(to_components)
 export(to_directed)
 export(to_egos)
 export(to_eulerian)
+export(to_galois)
 export(to_giant)
 export(to_matching)
+export(to_mentoring)
 export(to_mode1)
 export(to_mode2)
 export(to_multilevel)
@@ -421,6 +440,10 @@ importFrom(ggraph,geom_node_text)
 importFrom(ggraph,get_con)
 importFrom(ggraph,ggraph)
 importFrom(ggraph,scale_edge_width_continuous)
+importFrom(graphics,image)
+importFrom(graphics,par)
+importFrom(graphics,rect)
+importFrom(graphics,text)
 importFrom(igraph,E)
 importFrom(igraph,V)
 importFrom(igraph,add_edges)
@@ -502,6 +525,7 @@ importFrom(tidygraph,is.tbl_graph)
 importFrom(tidygraph,mutate)
 importFrom(tidygraph,node_is_isolated)
 importFrom(tidygraph,rename)
+importFrom(tidygraph,reroute)
 importFrom(tidygraph,tbl_graph)
 importFrom(tidygraph,to_subgraph)
 importFrom(tidygraph,with_graph)

NEWS.md

@@ -1,3 +1,105 @@
+# manynet 0.2.8
+
+2023-11-02
+
+## Package
+
+- Fixed tutorials documentation issue for CRAN
+
+# manynet 0.2.7
+
+2023-11-01
+
+## Making
+
+- Updated treatment of adjacency matrices in `as_igraph()` in accordance with upcoming updates to `{igraph}` package (closing #27)
+
+## Manipulating
+
+- Added `to_mentoring` function
+
+## Mapping
+
+- Fixed bugs in `autographr()` related to `edge_size` and `edge_color`
+- Fixed bugs and updated label placements for "circular" and "concentric" layouts for `autographr()`
+- Fixed issues with self-ties in `autographr()`
+- Updated tests for `autographr()`
+
+## Data
+
+- Added `ison_friends`, a one-mode network on character connections of a popular TV series
+
+# manynet 0.2.6
+
+2023-10-25
+
+## Package
+
+- Added documentation for tutorial helper functions
+
+## Making
+
+- `generate` examples leverage `autographr()` again
+
+## Manipulating
+
+- Fixed bug in `to_redirected.tbl_graph()`
+- `print.tbl_graph()` no longer mentions the object class
+
+## Mapping
+
+- `layout_tbl_graph_concentric()` now works with two-mode networks, multiple levels for one-mode networks, and accepts new vectors
+- Added `layout_tbl_graph_multilevel()` for laying out multilevel networks
+- Added `layout_tbl_graph_triad()` and `layout_tbl_graph_quad()` configurational layouts
+
+## Data
+
+- Added `ison_starwars`, a collection of seven weighted interaction networks on a popular film franchise
+- `ison_networkers` names are now in title case, not all caps
+
+# manynet 0.2.5
+
+2023-10-19
+
+## Package
+
+- Added 'tutorial0' for those less comfortable with R
+- Added `run_tute()` helper for quicker access to `{manynet}` and `{migraph}` tutorials
+- Added `extract_tute()` for extracting the main code examples from `{manynet}` and `{migraph}` tutorials
+- Added `purl = FALSE` to tutorial chunks that are not needed for extraction (thanks @JaelTan)
+- Updated website with new functions `run_tute()` and `extract_tute()`
+
+## Mapping
+
+- Fixed remaining issues with `node_group` and updated documentation
+
+# manynet 0.2.4
+
+2023-10-11
+
+## Package
+
+* README now includes Macports installation instructions
+* Added `{graphlayouts}`, `{ggforce}`, and `{multiplex}` to Suggested
+
+## Manipulating
+
+* Added `to_galois()` for transforming networks into partially ordered Galois lattices
+
+## Mapping
+
+* Fixed bug in node_shape argument in `autographr()`
+* Fixed bug in node_group argument in `autographr()`, closes #11
+* Fixed bug in inconsistent default colour scheme for node_color and node_group in `autographr()`
+* `autographr()` now automatically bends arcs for reciprocated ties when directed network is not too large/dense
+* `autographr()` now accepts unquoted variables as arguments
+* `autographr()` now uses `graphlayouts::layout_igraph_multilevel` where appropriate
+* Default node labelling now larger and further from nodes in circular layout
+
+## Data
+
+- `ison_algebra` now an anonymised network (again)
+
 # manynet 0.2.3
 
 2023-09-17