version 1.0.1

CHANGES

@@ -1,12 +1,18 @@
 
+		CHANGES IN `st' PACKAGE VERSION 1.0.1
 
+- reference to Opgen-Rhein and Strimmer (2007) updated.
+- updated email address
+- updated minimum R versions and version of corpcor package
 
-		CHANGES IN fdrtool VERSION 1.0.0
+
+
+		CHANGES IN `st' PACKAGE VERSION 1.0.0
 
 
 This is the first standalone release (31 August 2006).
 
-This package implements the "shrinkage t" statistics described
-in Opgen-Rhein and Strimmer (2006).  It also offers a convenient
+This package implements the "shrinkage t" statistic described
+in Opgen-Rhein and Strimmer (2007).  It also offers a convenient
 interface to a number of other regularized t-type statistics often
 used in high-dimensional case-control studies.    

DESCRIPTION

@@ -1,15 +1,15 @@
 Package: st
-Version: 1.0.0
-Date: 2006-31-08
+Version: 1.0.1
+Date: 2007-02-28
 Title: Shrinkage t Statistic
 Author: Rainer Opgen-Rhein and Korbinian Strimmer.
-Maintainer: Korbinian Strimmer <korbinian.strimmer@lmu.de>
-Depends: R (>= 2.0.0), corpcor (>= 1.4.3)
-Suggests:
-Description: This package implements the "shrinkage t" statistics 
-   described in Opgen-Rhein and Strimmer (2006).  It also offers
+Maintainer: Korbinian Strimmer <strimmer@uni-leipzig.de>
+Depends: R (>= 2.2.1), corpcor (>= 1.4.4)
+Suggests: limma, samr
+Description: This package implements the "shrinkage t" statistic 
+   described in Opgen-Rhein and Strimmer (2007).  It also offers
    a convenient interface to a number of other regularized t-type 
    statistics often used in high-dimensional case-control studies.    
 License: GPL version 2 or newer
 URL: http://www.strimmerlab.org/software/st/
-Packaged: Thu Aug 31 14:40:24 2006; strimmer
+Packaged: Wed Feb 28 00:01:13 2007; ksold

man/shrinkt.stat.Rd

@@ -10,7 +10,7 @@ shrinkt.fun(L, var.equal=TRUE, verbose=TRUE)
 
 \description{
   \code{shrinkt.stat} and \code{shrinkt.fun} compute the ``shrinkage t'' statistic
-   of Opgen-Rhein and Strimmer (2006).
+   of Opgen-Rhein and Strimmer (2007).
 }
 
 \arguments{
@@ -27,7 +27,7 @@ shrinkt.fun(L, var.equal=TRUE, verbose=TRUE)
   These are derived in a distribution-free fashion and with little a priori
   assumptions.   Despite its simplicity,
   it can be shown that ``shrinkage t'' procduces highly accurate rankings -
-  see Opgen-Rhein and Strimmer (2006).
+  see Opgen-Rhein and Strimmer (2007).
 }
 \value{
   \code{shrinkt.stat} returns a vector containing the ``shrinkage t'' 
@@ -39,12 +39,11 @@ shrinkt.fun(L, var.equal=TRUE, verbose=TRUE)
 }
 
 \references{
- Opgen-Rhein, R., and K. Strimmer. 2006. Accurate ranking of 
+ Opgen-Rhein, R., and K. Strimmer. 2007. Accurate ranking of 
  differentially expressed genes by a distribution-free shrinkage 
  approach.  
- 
- A preprint is available at 
- \url{http://strimmerlab.org/publications/shrinkt2006.pdf}.
+ Statist. Appl. Genet. Mol. Biol. \bold{6}:9.
+ (\url{http://www.bepress.com/sagmb/vol6/iss1/art9/})  
 }
 \author{
   Rainer Opgen-Rhein (\url{http://opgen-rhein.de})