Skip to content

Issues: crmackay/sblade

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

25 Open 9 Closed
25 Open 9 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

implemenation optimization: boyer-moore-harspool ready
#36 opened Nov 4, 2016 by crmackay
flamegraph and optimization ready
#35 opened Oct 30, 2016 by crmackay 0.0.2
add fastqio in progress
#34 opened Oct 30, 2016 by crmackay 0.0.1
data for paper: ready
#33 opened Oct 30, 2016 by crmackay
5 tasks
0.0.1
add pthreads, concurrency in progress
#32 opened Oct 30, 2016 by crmackay 0.0.1
performance testing
#31 opened Jun 27, 2016 by crmackay
add SIMD support
#29 opened Feb 10, 2016 by crmackay
add four-russians speed up ready
#28 opened Nov 9, 2015 by crmackay
fix alignment algorithm in progress
#27 opened Nov 9, 2015 by crmackay 0.0.1
add to homebrew
#26 opened Oct 21, 2015 by crmackay
add automated testing and deployment
#25 opened Oct 21, 2015 by crmackay
1 of 2 tasks
1
fill and clean up unit tests ready
#24 opened Oct 21, 2015 by crmackay
11 tasks
add deduplication support TODO
#23 opened Oct 21, 2015 by crmackay
plan for optimizing memory management
#21 opened Jul 29, 2015 by crmackay
new semi-global alignment algorithm with incorporation of quality data
#20 opened Jul 2, 2015 by crmackay
1
optimize search algorithm in progress TODO
#17 opened Jun 29, 2015 by crmackay
2 tasks
0.0.1
stdin/stdout pipe support ready
#14 opened Jun 18, 2015 by crmackay
data collection: total reads processed? Backlog in progress TODO
#11 opened Jun 18, 2015 by crmackay
1
unit test: data collection Backlog TODO
#10 opened Jun 18, 2015 by crmackay 0.0.1
add apriori probability calculation option enhancement
#8 opened Jun 11, 2015 by crmackay 0.0.3
draft paper in progress TODO
#6 opened Feb 18, 2015 by crmackay
5 tasks
0.0.1
@crmackay
submit for DOI TODO
#5 opened Feb 18, 2015 by crmackay 0.0.3
@crmackay
add config file parsing Backlog TODO
#4 opened Feb 18, 2015 by crmackay
2 tasks
0.0.3
@crmackay
add command line arguments in progress TODO
#3 opened Feb 18, 2015 by crmackay
5 tasks
0.0.1
@crmackay
Documentation Backlog TODO
#1 opened Feb 18, 2015 by crmackay
3 tasks
0.0.2
@crmackay
ProTip! Follow long discussions with comments:>50.