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This repository has been archived by the owner on Feb 7, 2022. It is now read-only.

Issues: cschin/Peregrine

22 Open 13 Closed
22 Open 13 Closed
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Issues list

Submit a job with peregrine
#39 opened Dec 3, 2020 by RenzoTale88
1
Run peregrine with singularity
#37 opened Jul 30, 2020 by RenzoTale88
1
slow: containerized Peregrine on gpfs file system
#36 opened May 27, 2020 by ptrebert
1
Exception: Some tasks are recently_done but not satisfied
#33 opened Apr 26, 2020 by chhylp123
6
Upsteam kseq
#32 opened Feb 27, 2020 by Phhere
1
Peregrine wihout Docker?
#31 opened Jan 22, 2020 by Tdanis
9
core file produced but final output is created
#29 opened Jan 3, 2020 by aclum
1
python2.7: command not found
#26 opened Dec 16, 2019 by zhenzhenyang-psu
2
Racon and Pilon
#24 opened Dec 11, 2019 by mictadlo
1
pypeflow Error Unable to run the assembly
#23 opened Dec 9, 2019 by sum732
1
Peregrine not recognising options
#22 opened Dec 7, 2019 by ghost
7
error in 3-asm duplicate This issue or pull request already exists
#20 opened Nov 20, 2019 by zhenzhenyang-psu
2
Networkx < 2.4 improvment
#19 opened Oct 23, 2019 by mrvollger
Question on SHIMMER and MC
#17 opened Oct 7, 2019 by kfletcher88
1
crash in 2-ovlp
#16 opened Oct 6, 2019 by macmanes
4
shmr_map issue
#15 opened Oct 4, 2019 by smoretti
4
Question about best practices question Further information is requested
#13 opened Aug 9, 2019 by cschin
1
error in building docker image
#12 opened Jul 3, 2019 by githubrookie1
1
Human genome assembly parameters help wanted Extra attention is needed
#11 opened Jun 11, 2019 by kautto
@kautto
5
Add script to identify un-assembled reads enhancement New feature or request
#9 opened Jun 4, 2019 by cschin
@cschin
Add a clean up script enhancement New feature or request
#8 opened Jun 4, 2019 by cschin
@cschin
Add peregrine 'hello world' runbook enhancement New feature or request
#5 opened Jun 2, 2019 by a-khalak
@a-khalak
6
ProTip! Exclude everything labeled bug with -label:bug.