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summarizing-medical-evidence

Data and annotations from our paper Summarizing, Simplifying, and Synthesizing Medical Evidence Using GPT-3 (with Varying Success).

Table Schema

You will find three .csv files that each contain all annotations collected across 100 documents, split into the single document and multi document case. Each .csv file corresponds to annotations from 1 annotator. Note that for rows with "Survey Question", you can find a detailed description of the field in the Appendix section of the paper.

Single Document Columns

Column Name Description
text Input text
abstract Abstract (from input text)
summary GPT-3 generated summary
plain_summary GPT-3 generated plain summary
containsKeyResult Survey Question
population Survey Question
outcome Survey Question
omissions Survey Question
errors Survey Question
coherence Survey Question
usefulness Survey Question
containsKeyResult_plain Survey Question
population_plain Survey Question
intervention_plain Survey Question
outcome_plain Survey Question
errors_plain Survey Question
coherence_plain Survey Question
readability_plain Survey Question
substitution_plain Survey Question
usefulness_plain Survey Question
annotator Annotator ID
intervention_addl Survey Question
population_addl Survey Question
outcome_addl Survey Question
answer Survey Question
answer_plain Survey Question
newConcepts_plain Survey Question
outcome_addl_plain Survey Question
intervention_addl_plain Survey Question
newConcepts Survey Question
population_addl_plain Survey Question

Multi-Document Columns

Column Name Description
text Human-written summary
inputs Input to GPT-3
conclude GPT-3 generated summary
evidenceTarget Survey Question (see paper)
evidenceGenerated Survey Question
agreeWithConclusion Survey Question
contradictions Survey Question
supportedByEvidence Survey Question
annotator Annotator ID
textbox Free text option

If you use our data, please cite our work with the following:

@inproceedings{Shaib2023SummarizingSA, title={Summarizing, Simplifying, and Synthesizing Medical Evidence Using GPT-3 (with Varying Success)}, author={Chantal Shaib and Millicent L. Li and Sebastian Joseph and Iain James Marshall and Junyi Jessy Li and Byron Wallace}, year={2023} }Summarizing, Simplifying, and Synthesizing Medical Evidence Using GPT-3 (with Varying Success),

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