Rmarkdown #39
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Rmarkdown #39
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Owner
csoneson
commented
Jan 2, 2019
csoneson
commented
- Fix the report generation function
- Simplify result representation so that the SEs are only stored once
- Use SEs directly instead of edgeR output in shiny prep
- Add some more checks of input arguments to report generation
- Update edgeR code to the current recommendations
- Make shiny preparation script depend on bigwig files
- output results from DRIMSeq analysis as two SummarizedExperiment object. (on gene level and on transcript level, respectively)
- add R script to render Rmd file for rule Shiny
1. remove the description to use `iResView` 2. update the description to use `iSEE`.
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