forked from voidptr/Caper
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NOTES
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NOTES
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Todo:
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add mapquery stuff
- to CLI
- to pyrex wrapper
- to tests
do explicit recasting to remove the huge pile of warnings between signed/unsigned
beef up the testing suite to cover:
- memory alloc/dealloc
- looking for memory leaks
- different sizes of input files (corner cases, etc)
- path tests
- all parameter combinations
rearrange the directories so it uses the standard-ish directory structures
(see khmer for an example)
Think about:
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fixed read length per database... can we make it variable? is it important?
python slicing vs caper intervals? would it be easy to use Python
slice coords, e.g. 'x:y' does not include y?
Maybe have 'caper-index' (lower case please :) and 'caper-view' as binaries?
Contemplate directory re-org. If the Pyrex stuff depends on CaperGCC, we
should merge them.
Pyrex wrapping: for CTB
-----------------------
crashes on exceptions ;). look at screed?
Later:
------
source consolidation? move to google code?
copyright
license
benchmarking of course...