EB_spikes_trains

Python Code for Paper: An Efficient and Flexible Spike Train Model via Empirical Bayes Link

models.py

Simulation and Estimations using the 'SODS', NB-GLM, Poisson-GLM models.

snn.py

Simulation for Spiking Neural Network Data

mcmc.py

Estimation using MCMC (NUTS).

examples.py

Examples of simulation and estimations using the 'SODS', NB-GLM, Poisson-GLM models. (To be done)

package required:

python
brian2
matplolib
scipy
numpy
pandas
scikit-learn
pymc3