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2d registration #4
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Hi @d5423197, Welcome to image registration and thanks for your interest in our work. Currently, I don't have any plan to extend this repo into 2D. Affine registration in 2D is computationally tractable for convex optimization/multi-start procedure (see here). You can basically compute the optimal solutions without any learning/CNN/ViT. Yet, if there are more people requesting 2D C2FViT, I will update this repo. |
Hello author, Thanks for your quick response. I am sorry. Because I am new to this area, I can barely understand what you are talking about. "You can basically compute the optimal solutions without any learning/CNN/ViT." What do you mean by this? Do you mean I do not need to use any deep learning method for 2d registration? I may need some pre-knowledge for this, could you please introduce me with some relevant papers or tutorials? My current situation is: Thanks for your kindly help. ZD |
Hi ZD,
Exactly. You don't have to use any deep learning method for 2d registration. Because there are only 6 learnable parameters in 2D affine matrix (https://en.wikipedia.org/wiki/Affine_transformation). You can easily find the optimal solutions by searching the whole space (effectively). If you are looking for off-the-self tools for 2D registration, you may check out Elastix (https://simpleelastix.readthedocs.io/Introduction.html) and ANTs (https://antspy.readthedocs.io/en/latest/registration.html). These methods achieve descent results in 3D brain registration as reported in our paper. More importantly, these methods support 2D images. If you are looking for a keypoint detection and matching-based affine registration method, you can simply compute the SIFT keypoints for each image and match the keypoints with RANSAC (https://ieeexplore.ieee.org/document/7738198). Then, the affine transformation can be derived by the least-square fitting of the matching. The latest development of such a method in deep learning can be found at https://openreview.net/forum?id=OrNzjERFybh. |
Hello there, I really appreciate your reply. I will definitely look into the info and tools you advised. This info really helps me out. Best, ZD |
Hey @cwmok, Thank you very much for your capable model. The architecture with long- and short-range dependencies sounds very promising. I was also looking for a 2D image registration neural network because I cannot use analytical algorithms for my problem. I want to "puzzle" neighboring pieces together. Therefore, I would also appreciate a hint where I can change your Training loop or model in order to support 2D image registration. Cheers, |
Hello author,
I am new to this area. Recently I found this paper, does this repo support 2d registration?
Thanks,
ZD
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