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funfunchen committed Sep 12, 2019
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Expand Up @@ -110,6 +110,9 @@ please find more details in the [input and arguments part](#input-files) for the
3. For demo data, please see `?rareGWAMA.cond.single`.

### Gene based tests <a name="gene-based-tests"></a>

**For more details, please see the [SHOWCASE](https://funfunchen.github.io/pages/rareGWAMA_page)**

1.The command should be like:
```
res.gene <- rareGWAMA.gene(score.stat.file, imp.qual.file=imp.qual.file, vcf.ref.file, refFileFormat="vcf.vbi", anno=anno, annoType=c('Nonsynonymous','Stop_Gain',"Essential_Splice_site"), rvtest='VT', ref.ancestry=ref.ancestry, trans.ethnic=TRUE, study.ancestry=study.ancestry, maf.cutoff=0.01);
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