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riverconn

Git repository for R package rivercon.

Package documentation is available in the vignette and here: https://damianobaldan.github.io/riverconn_tutorial/

Further information on functions implemented in the package and potential uses are described in the paper: https://doi.org/10.1016/j.envsoft.2022.105470

The latest version of the package is available from GitHub: https://github.com/damianobaldan/riverconn

Installation

devtools::install_github("damianobaldan/riverconn", build_vignettes = TRUE)

Changelog

0.3.32 to 0.3.33

  • fixed issue with weight_metadata object in inner_t_index_calculation

0.3.31 to 0.3.32

  • default parallel computation option switched to FALSE

0.3.30 to 0.3.31

  • fixed CRAN notes

0.3.29 to 0.3.30

  • removed ggnetwork dependency

0.3.28 to 0.3.29

  • fixed issue with param_l in inner_d_index_calculation function

0.3.27 to 0.3.28

  • fixed another bug in index_calculation for index_type = "sum"; added error message

0.3.26 to 0.3.27

  • fixed bug in index_calculation for index_type = "sum"

0.3.25 to 0.3.26

  • fixed issue in vignette visualization

0.3.24 to 0.3.25

  • fixed example in d_index_calculation function

0.3.23 to 0.3.24

  • updated documentation for disp_type = "leptokurtic"

0.3.22 to 0.3.23

  • added disp_type = "leptokurtic" in the index_calculation function

0.3.21 to 0.3.22

  • fixed bug in index_calculation when index_type = "reach" and index_mode = "from"

0.3.20 to 0.3.21

  • updated documentation and vignette

0.3.18 to 0.3.20

  • updated functions documentation and vignette

0.3.17 to 0.3.18

  • fixed a bug that lead to index_calculation crash when similar vertex attributes are used

0.3.16 to 0.3.17

  • vignette updated

0.3.16 to 0.3.17

  • DESCRIPTION file updated

0.3.15 to 0.3.16

  • examples changed

0.3.14 to 0.3.15

  • changed matrix-vector multiplication method in index_calculation to avoid running out of memory

0.3.13 to 0.3.14

  • fixed bug in t_index_calculation for index_type = "reach"

0.3.12 to 0.3.13

  • updated error messages in B_ij_fun

0.3.11 to 0.3.12

  • fixed bugs in examples

0.3.7 to 0.3.11

  • added examples to exported functions

0.3.7 to 0.3.10

  • minor fixes for CRAN upload

0.3.6 to 0.3.7

  • vignette updated

0.3.5 to 0.3.6

  • added type = "sum" in index_calculation to calculate barriers attributes sum regardless of the network structure (this facilitates the calculation of area fragmentation indices)

0.3.4 to 0.3.5

  • typos corrected in the documentation

0.3.3 to 0.3.4

  • vignette updated and link to online guide included in the documentation

0.3.2 to 0.3.3

  • term dam replaced with barrier through all the documentation and vignette

0.3.1 to 0.3.2

  • vignette updated

0.2.9 to 0.3.1

  • minor changes in d_index_calculation function to avoid dplyr::join printing messages to screen

0.2.8 to 0.2.9

  • minor changes in d_index_calculation documentation

0.2.7 to 0.2.8

  • minor changes in B_ij_fun and c_ij_fun

0.2.6 to 0.2.7

  • changed architecture of B_ij_fun to improve speed (now relying on dodgr package to speed up shortest paths calculations on graphs)

0.2.5 to 0.2.6

  • changed architecture of c_ij_fun to improve speed (now relying on dodgr package to speed up shortest paths calculations on graphs)
  • B_ij_fun is still the slow version

0.2.4 to 0.2.5

  • edited vignette

0.2.3 to 0.2.4

  • fixed bug on t_index_calculation (... argument and partial match issue)
  • added error message on index_calculation when nodes_id is not charachter type

0.2.2 to 0.2.3

  • fixed bug on d_index_calculation (inputs pass_u and pass_d not recognized)

0.2.1 to 0.2.2

  • minor changes to functions documentation and error messages
  • fixed bug on d_index_calculation (... argument and partial match issue)

0.1.9 to 0.2.1

  • changed architecture of d_index_calculation to simplify debug
  • introduced and documented function one_barrier_removal_index

0.1.8 to 0.1.9

  • fixed bug on d_index_calculation

0.1.7 to 0.1.8

  • fixed bug on set_c_directionality and set_B_directionality when argument "asymmetric" is provided
  • fixed issue on index_calculation and d_index_calculation: now output labels are consistent with user-inputted labels

0.1.7

  • first version on GitHub

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git repository for R package riverconn

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