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alleleCount-FixVAF
alleleCount-FixVAF PublicForked from cancerit/alleleCount
Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each allele [ACGT] at that location (given any filter settings). Alte…
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FixVAF
FixVAF PublicCode to remove bias from Isaac aligned data by clipping all reads for variant positions by 5 bases and producing a modified vcf file.
Python
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containers
containers PublicForked from BioContainers/containers
Bioinformatics containers
Dockerfile
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