-
Notifications
You must be signed in to change notification settings - Fork 257
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Add analyze color function to analyze submodule #1170
Merged
Merged
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
For image-based output, the iterator inputs the output image to build a figure. But for charts this breaks the analysis
Only plots data of list type (distributional data)
nfahlgren
added
enhancement
Enhancements to existing features
work in progress
Mark work in progress
labels
May 19, 2023
Codecov Report
@@ Coverage Diff @@
## release-4.0 #1170 +/- ##
=============================================
Coverage 100.00% 100.00%
=============================================
Files 167 168 +1
Lines 7268 7351 +83
=============================================
+ Hits 7268 7351 +83
Flags with carried forward coverage won't be shown. Click here to find out more.
|
nfahlgren
added
ready to review
and removed
work in progress
Mark work in progress
labels
May 22, 2023
HaleySchuhl
approved these changes
May 23, 2023
46 tasks
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Describe your changes
Moves the
analyze_color
function topcv.analyze.color
. Refactors the code to use the_iterate_analysis
helper function. Supports labeled masks with automatic iteration over multiple input objects.Also adds a built-in distribution plotting method to the
Outputs
class that is used bypcv.analyze.color
and other analysis functions that plot histograms.Type of update
Is this a: New feature or feature enhancement
For the reviewer
See this page for instructions on how to review the pull request.
plantcv/mkdocs.yml
updating.md