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PlantCV v3.5.0

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@HaleySchuhl HaleySchuhl released this 16 Jul 21:30
v3.5.0
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PlantCV v3.5.0 adds new functionality and fixes several bugs and usability issues.

Summary of changes:

  • Added pcv.analyze_thermal_values to handle thermal data analysis.
  • Update Dockerfile
  • Added a thermal tutorial
  • Added functionality to pcv.readimage to allow it to handle .csv format files for thermal imaging.
  • Add pcv.visualize.clustered_contours which creates an image that assists with debugging parameters upstream of using pcv.cluster_contours
  • Bug fix regarding listing observations while running PlantCV parallel workflows.
  • Removed legacy format where pcv.analyze_* functions returned lists. When a function returns a single image it will no longer store that image inside a list object.
  • Various documentation updates and improvements
  • The function pcv.within_frame now stores an observation in addition to returning a boolean to the user
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