Metagenomics taxa abundance data in R

Materials for taxa abundance/metagenomics hands-on training session

Part 1

• Working with taxa abundance data in R
• Working with the MGnify portal from R

Part 2

• Comparing runs and samples
• Exercises on taxa abundance data retrieval and analysis

These materials are intended for a 2 hour hands-on training session at a metagenomics workshop, but should be suitable for self-study. You should probably allow 3 hours for self-study.

(C) 2016-19 Darren J Wilkinson