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Update evaluation.md
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kingmanzhang committed May 17, 2019
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Expand Up @@ -11,7 +11,7 @@ Deliverable | Functionality | Quality & Satisfaction | Enhancements | Milestone
LOINC2HPO paper | Publication | feedback from npj Website | n/a. | done, see [Zhang et al, 2019](https://www.nature.com/articles/s41746-019-0110-4).
LOINC2HPO website | [tab](https://hpo.jax.org/app/browse/term/HP:0002153) on HPO website | CD2H "bang on it" sessions; iDTF and NCATS site review | Link [blog](https://npjdigitalmedcommunity.nature.com/users/256992-aaron-zhang/posts/48542-integrating-laboratory-tests-for-deep-phenotyping-and-biomarker-discovery) to HPO website; monthly enhancements to website; documentation page| https://github.com/data2health/ehr2HPO.prj/milestone/4
Mutual information algorithm | Implementation in Java | testing on Asthma dataset | testing on CTSA data| https://github.com/data2health/ehr2HPO.prj/milestone/9
Planning on a multi-CTSA project | Workflow for coming 6 montsh | Submit IRB and other documentation (U Colorado, JHU) | n/a| https://github.com/data2health/ehr2HPO.prj/milestone/9
Planning on a multi-CTSA project | Workflow for coming 6 montsh | Submit IRB and other documentation (U Colorado, JHU) | n/a| https://github.com/data2health/ehr2HPO.prj/milestone/6
Analysis of test dataset | Initial analysis of MIMIC 3 (ICU) data | validation MI algorithm--do we find published biomarkers? Do we find more significant hits than in random permutations? | -| https://github.com/data2health/ehr2HPO.prj/milestone/9
Analysis of CTSA data | Initial analysis of JHU/Colorado data | In depth analysis and comparison of datasets | - | https://github.com/data2health/ehr2HPO.prj/milestone/5
Cross-site clustering | Implementation in Java | Testing on MIMIC data (permutations to simulate 2 datasets) | extend to CTSA data in subsequent project phases -| https://github.com/data2health/ehr2HPO.prj/milestone/10
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