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Source  : 4228b61
Branch  : main
Author  : Jason Williams <JasonJWilliamsNY@gmail.com>
Time    : 2024-04-10 15:57:05 +0000
Message : Merge pull request #271 from naupaka/main

Change img html tags to markdown in ep 3 per #270
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actions-user committed Apr 10, 2024
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8 changes: 4 additions & 4 deletions 03-basics-factors-dataframes.md
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Expand Up @@ -181,7 +181,7 @@ you have the `variants` object, listed as 801 obs. (observations/rows)
of 29 variables (columns). Double-clicking on the name of the object will open
a view of the data in a new tab.

<img src="fig/rstudio_dataframeview.png" alt="rstudio data frame view" style="width: 1000px;"/>
![RStudio data frame view]("fig/rstudio_dataframeview.png")

## Summarizing, subsetting, and determining the structure of a data frame.

Expand Down Expand Up @@ -512,7 +512,7 @@ These packages will be installed into "~/work/genomics-r-intro/genomics-r-intro/
# Installing packages --------------------------------------------------------
- Installing ggplot2 ... OK [linked from cache]
Successfully installed 1 package in 5.2 milliseconds.
Successfully installed 1 package in 5.5 milliseconds.
```

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Expand Down Expand Up @@ -1263,12 +1263,12 @@ First, in the RStudio menu go to **File**, select **Import Dataset**, and
choose **From Excel...** (notice there are several other options you can
explore).

<img src="fig/rstudio_import_menu.png " alt="rstudio import menu" style="width: 600px;"/>
![RStudio import menu]("fig/rstudio_import_menu.png")

Next, under **File/Url:** click the <KBD>Browse</KBD> button and navigate to the **Ecoli\_metadata.xlsx** file located at `/home/dcuser/dc_sample_data/R`.
You should now see a preview of the data to be imported:

<img src="fig/rstudio_import_screen.png " alt="rstudio import screen" style="width: 1200px;"/>
![RStudio import screen]("fig/rstudio_import_screen.png")

Notice that you have the option to change the data type of each variable by
clicking arrow (drop-down menu) next to each column title. Under **Import
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2 changes: 1 addition & 1 deletion md5sum.txt
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Expand Up @@ -6,7 +6,7 @@
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"episodes/01-r-basics.Rmd" "2f4b7fd244990f97e0c2fe88bae2618b" "site/built/01-r-basics.md" "2024-04-04"
"episodes/02-data-prelude.Rmd" "ab2b1fd3cdaae919f9e409f713a0a8ad" "site/built/02-data-prelude.md" "2024-04-04"
"episodes/03-basics-factors-dataframes.Rmd" "d46879cbe37a7b1f21a9ed50f49ed4d5" "site/built/03-basics-factors-dataframes.md" "2024-04-10"
"episodes/03-basics-factors-dataframes.Rmd" "78de77380f2b4bfd76622a8fc1e10f99" "site/built/03-basics-factors-dataframes.md" "2024-04-10"
"episodes/04-bioconductor-vcfr.Rmd" "10eb69b4697d7ecb9695d36c0d974208" "site/built/04-bioconductor-vcfr.md" "2024-04-04"
"episodes/05-dplyr.Rmd" "f74055bd8677338a213e0a0c6c430119" "site/built/05-dplyr.md" "2024-04-04"
"episodes/06-data-visualization.Rmd" "0b45534421bad05f040b24c40b6da71b" "site/built/06-data-visualization.md" "2024-04-04"
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