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Implement HierarchicalLogLikelihood #29

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9 of 13 tasks
DavAug opened this issue Nov 15, 2020 · 0 comments · Fixed by #66
Closed
9 of 13 tasks

Implement HierarchicalLogLikelihood #29

DavAug opened this issue Nov 15, 2020 · 0 comments · Fixed by #66
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@DavAug
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DavAug commented Nov 15, 2020

A HierarchicalLogLikelihood

  • Takes a list of pints.LogPDFs
  • Takes a list of PopulationLogPDFs.
  • Implement a PopulationLogPDF base class
    • n_pop_params - population level parameters
    • sample for fixed pop parameters
    • call takes individual and pop parameters and returns score
    • pools_parameters return False or True
  • Implement a PoolParameters class that simply takes all parameters and sets them equal.
    • Evaluation returns 0
    • sampling return the input parameter
  • HierarchicalLogLikelihood checks whether pop pools, if so, adds just n_pop_params to input parameters, if not adds individual params and n_pop_params.
  • Then distributes the right parameters to the right log_likelihoods and PopulationLogPDFs. Possibly index entries for each individual loglikelihood and also index(mask) parameters for the population parameters.

Implement support in the ProblemModellingController

  • Extend the set_population_model class.
@DavAug DavAug self-assigned this Dec 10, 2020
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DavAug added a commit that referenced this issue Dec 11, 2020
DavAug added a commit that referenced this issue Dec 11, 2020
DavAug added a commit that referenced this issue Dec 11, 2020
DavAug added a commit that referenced this issue Dec 11, 2020
DavAug added a commit that referenced this issue Dec 11, 2020
DavAug added a commit that referenced this issue Dec 11, 2020
DavAug added a commit that referenced this issue Dec 11, 2020
DavAug added a commit that referenced this issue Dec 11, 2020
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DavAug added a commit that referenced this issue Dec 11, 2020
DavAug added a commit that referenced this issue Dec 11, 2020
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