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feat(nm): Nuclear medicine normalizer (#384)
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* Adds NM normalizer

* Working NM normalizer allows for saving SEG to file.

* feat(normalizers): Add NM normalizer to allow creation of Nuclear Medicine segmentations

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Co-authored-by: Andrew Laughland <alaughland@rapisdosimetry.com>
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ahlaughland and Andrew Laughland committed Mar 15, 2024
1 parent fcbd9cc commit 76ca6f5
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Showing 2 changed files with 13 additions and 0 deletions.
1 change: 1 addition & 0 deletions src/DicomMetaDictionary.js
Original file line number Diff line number Diff line change
Expand Up @@ -357,6 +357,7 @@ class DicomMetaDictionary {
// Subset of those listed at:
// http://dicom.nema.org/medical/dicom/current/output/html/part04.html#sect_B.5
DicomMetaDictionary.sopClassNamesByUID = {
"1.2.840.10008.5.1.4.1.1.20": "NMImage",
"1.2.840.10008.5.1.4.1.1.2": "CTImage",
"1.2.840.10008.5.1.4.1.1.2.1": "EnhancedCTImage",
"1.2.840.10008.5.1.4.1.1.2.2": "LegacyConvertedEnhancedCTImage",
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12 changes: 12 additions & 0 deletions src/normalizers.js
Original file line number Diff line number Diff line change
Expand Up @@ -34,6 +34,7 @@ class Normalizer {
sopClassUID = sopClassUID.replace(/[^0-9.]/g, ""); // TODO: clean all VRs as part of normalizing
let toUID = DicomMetaDictionary.sopClassUIDsByName;
let sopClassUIDMap = {};
sopClassUIDMap[toUID.NMImage] = NMImageNormalizer;
sopClassUIDMap[toUID.CTImage] = CTImageNormalizer;
sopClassUIDMap[toUID.ParametricMapStorage] = PMImageNormalizer;
sopClassUIDMap[toUID.MRImage] = MRImageNormalizer;
Expand All @@ -56,6 +57,7 @@ class Normalizer {
static isMultiframeSOPClassUID(sopClassUID) {
const toUID = DicomMetaDictionary.sopClassUIDsByName;
const multiframeSOPClasses = [
toUID.NMImage,
toUID.EnhancedMRImage,
toUID.LegacyConvertedEnhancedMRImage,
toUID.EnhancedCTImage,
Expand Down Expand Up @@ -475,6 +477,15 @@ class EnhancedUSVolumeNormalizer extends ImageNormalizer {
super.normalize();
}
}
class NMImageNormalizer extends ImageNormalizer {
normalize() {
super.normalize();
// TODO: provide option at export to swap in LegacyConverted UID
let toUID = DicomMetaDictionary.sopClassUIDsByName;

this.dataset.SOPClassUID = toUID.NMImage;
}
}

class CTImageNormalizer extends ImageNormalizer {
normalize() {
Expand Down Expand Up @@ -526,6 +537,7 @@ export { MRImageNormalizer };
export { EnhancedCTImageNormalizer };
export { EnhancedMRImageNormalizer };
export { EnhancedUSVolumeNormalizer };
export { NMImageNormalizer };
export { CTImageNormalizer };
export { PETImageNormalizer };
export { SEGImageNormalizer };
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